Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2195 ATGGACTACAGCTCTGACGAAGATTCAGATATCAGTGACTCTGAGATAGATGAGTACTCTCAGAAACCATATGAAGATTTAAGGTCAGGGAAATACAAGGTTAAACATGTGAATGGAGCTCTTAGATGTCCTTTTTGTGCTGGGAAGAAGAAACAAGATTACAAATATAAGGAGTTGTTTCAACATGCTTCAGGGGTGAGTAAGGGTTCTGCTAACAGAAGTGCACAACAGAAGGCAAACCACCTGGCATTGGCCAGGTATTTGGAGATTGACCTAGCCAGTGAAGCAGAGCAAGTCCAGCGCCCGGCTTTACCCCAACCTGTCAGTAAACCTCTACAGCAACATGATCTTTATGTTTGGCCCTGGACGGGCATAATTGTTAACATAAAGAATAAATCGCACGATTCTGGACACTGGTTGAAGGAATTTGCTAAATACAAACCACTAGATATTCATATATTCTTGATAGACGGTGAGCTGATTGCTCAGGCTGTGATAGACTTTAACAATGACTGGAATGGTTTCATGAATGCAAGTGAATTTGAGAAATCGTTTGAAACTGCACGCCATGGTAAGAAGGATTGGAATTTGAAGAAGCTGGAAGCTGGATCAGACATTTATGGATGGGTTGCACGGGAAGTTGATTATAATTGTGGAGGGCCAATTGGGGAATACCTTCGAAACAAAGGAAGGTTGAGGACAGTCTCAGATATTGTTCAAGAAGCATCTGAAAGCCGAAATAGTATTGTGGCAAATCTTGCAAATGAAATCGATCTTACCAATGAAAACCTTGACGAAATGCAGTACAAGTACAATGAGAAGACTATGTCCTTGAGTAGGATGCTCGAGGATAAAGACAGGCTACACAGTGCTTTTGTTGAAGAATCAAGGAATATGCAGCGTAGAGCTCGTAATGAGGTGCGAAGGATCTTGGAAGAACAAGAAAAGTTGAGCAGTGAATTGGAGGCAAAAAGGCGGAAGCTTGATTCCTGGAGTAGAGATCTAAACAAACGTGAGGTACTAACTGATCAAGAGAGGCAGAAACTTGAAGAGGACAAGAAGAAGAAAGATTTGAGGAATGAATCACTCTTGTTGGCTTCAAAGGAGCAGGAGATAGCTGATGAGAATGTTTTAAGGCTTGTCGCGGAGCAACAGAGAGAGAAGGAGGAGGCCTTGAACAAGATCCTTCAGCTGGAAAAACAGCTAGATGCCAAACAGAAATTGGAGATGGAAATTGAGGAGTTAAAAGGGAAATTACAAGTTATGAAACATCTTGGAGATGAAGATGATGTAGCTGTCCAGAGTAAGATGAAAGAAATGAATGATGAATTGGAAGAGAAAAAAGATAATCTGGAGAGTATGGAGGCCATGAATCAACAGCTCTTTGTCAAGGAGCGCCAAAGCAATGATGAACTACAGGAAGCTCGTAAAGAATTAATAAAAGGGTTGGACGATATGCTGAATGGTCCTAGAACTAATATTGGGCTCAAGAGAATGGGAGAACTTGATCAGAAAGTTTTTGTGAATTGCTGCAAGAAAAGATTTCCTCTCGAAGATGCGGGGACAAAGGGTGTTGAGCTTTGCTCTTTGTGGCAGGAGAACGTGAAGAATTCATCTTGGCATCCATTTAAAGTGATCAATGCTGATGATAAACCAGAGTCCATTATAAATGAGGATGATAATCAATTACGACAGCTCAAGCAGGAATGGGGAGATGAGATACACTCAGCTGTAACAACAGCTTTGAAAGAATTACTTGAATACAATGCAAGTGGTGGATATACTGTTTTTGAGCTGTGGAACTTCAAGGAACAAAGGAAAGCAACATTGAAGGAAGTCATCAGTTACATTGTGGATAAAATTAAGCCACCTAAACGCAAAAGAGCATAG 1890 0.4101 MDYSSDEDSDISDSEIDEYSQKPYEDLRSGKYKVKHVNGALRCPFCAGKKKQDYKYKELFQHASGVSKGSANRSAQQKANHLALARYLEIDLASEAEQVQRPALPQPVSKPLQQHDLYVWPWTGIIVNIKNKSHDSGHWLKEFAKYKPLDIHIFLIDGELIAQAVIDFNNDWNGFMNASEFEKSFETARHGKKDWNLKKLEAGSDIYGWVAREVDYNCGGPIGEYLRNKGRLRTVSDIVQEASESRNSIVANLANEIDLTNENLDEMQYKYNEKTMSLSRMLEDKDRLHSAFVEESRNMQRRARNEVRRILEEQEKLSSELEAKRRKLDSWSRDLNKREVLTDQERQKLEEDKKKKDLRNESLLLASKEQEIADENVLRLVAEQQREKEEALNKILQLEKQLDAKQKLEMEIEELKGKLQVMKHLGDEDDVAVQSKMKEMNDELEEKKDNLESMEAMNQQLFVKERQSNDELQEARKELIKGLDDMLNGPRTNIGLKRMGELDQKVFVNCCKKRFPLEDAGTKGVELCSLWQENVKNSSWHPFKVINADDKPESIINEDDNQLRQLKQEWGDEIHSAVTTALKELLEYNASGGYTVFELWNFKEQRKATLKEVISYIVDKIKPPKRKRA* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2195 629 Coils Coil 250 270 - -
Lja3g2195 629 Pfam XH domain 497 627 IPR005379 -
Lja3g2195 629 Coils Coil 293 334 - -
Lja3g2195 629 Pfam XS zinc finger domain 43 85 IPR005381 GO:0031047
Lja3g2195 629 Gene3D XS domain 111 272 IPR038588 -
Lja3g2195 629 Coils Coil 381 425 - -
Lja3g2195 629 MobiDBLite consensus disorder prediction 1 23 - -
Lja3g2195 629 Pfam XS domain 116 217 IPR005380 GO:0031047
Lja3g2195 629 PANTHER FACTOR OF DNA METHYLATION 1-RELATED 4 628 - -
Lja3g2195 629 PANTHER RIBONUCLEASE P SUBUNIT P38 4 628 IPR045177 GO:0080188
Lja3g2195 629 Coils Coil 430 478 - -
Lja3g2195 629 Coils Coil 341 361 - -
Lja3g2195 629 CDD RRM_like_XS 118 216 IPR005380 GO:0031047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2195 Lja-Chr3 25995278 26003280 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2195 - - gmx:100798940 1050.04