Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2190 ATGCTTCTCTGCCGGAAAAGCTCCCGGAACGCCAACGCCGCCGTTTCGGGATCGGTGCCGGTGTACCTCAATGTCTACGATCTGACACCGATTAACGGTTACGCTTACTGGTTCGGCCTCGGAGTTTACCATTCCGGCGTAGAAGTTCATGGCGTTGAGTACGCGTTCGGTGCTCATGAGTACTCGTCGACGGGGATATTCGAAGGGGAACCGAAGCGGTGCGAAGGGTTTAGGTTCCGGAAGACGATTCTGATCGGGAAAACGAGCATGGGTCCCGGTGAGGTGAGGGCGGTGATGGAAGAACTTGCGGCGGAGTATAGAGGAAACGCTTACAATCTCATCACAAAGAACTGTAACCATTTCTGCAATGCTGCTTGTGTTAGGCTTACTGAGAATCCAATACCCAGTTGGGTCAATCGTCTTGCCAGGATTGGTTTTTTGTGCAATTGTGTTCTTCCGGTGACTTTGAATTCAACAAAAGTTAGGCATCATAAAATAGAAGAAAAGCAGCAATGTGGAGAGAAGCAAGCATTAACAAGTGAACCAAACAAGCTCACTGTCTCAAATTCAACATCCTCTTCATCTTCCCCTACTTCTTCTAGCTCCGGATTGAGAAGGGGAAGGAGTAGAACCAGACGTGCTCGTCCTCCATCTTCACCTTTCATTATTGGGTCTTCTACTTCTTCTACATCTTGA 696 0.4856 MLLCRKSSRNANAAVSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGVEVHGVEYAFGAHEYSSTGIFEGEPKRCEGFRFRKTILIGKTSMGPGEVRAVMEELAAEYRGNAYNLITKNCNHFCNAACVRLTENPIPSWVNRLARIGFLCNCVLPVTLNSTKVRHHKIEEKQQCGEKQALTSEPNKLTVSNSTSSSSSPTSSSSGLRRGRSRTRRARPPSSPFIIGSSTSSTS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2190 231 MobiDBLite consensus disorder prediction 175 205 - -
Lja3g2190 231 MobiDBLite consensus disorder prediction 172 231 - -
Lja3g2190 231 PANTHER F23A5.4 PROTEIN 9 227 - -
Lja3g2190 231 PANTHER DESUMOYLATING ISOPEPTIDASE 9 227 IPR008580 GO:0008233
Lja3g2190 231 Gene3D PPPDE domains 15 175 IPR042266 -
Lja3g2190 231 SMART DUF862_2a 19 157 IPR008580 GO:0008233
Lja3g2190 231 ProSiteProfiles PPPDE domain profile. 19 156 IPR008580 GO:0008233
Lja3g2190 231 Pfam PPPDE putative peptidase domain 20 153 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2190 Lja-Chr3 25948267 25949820 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2190 K22763 - gmx:100796813 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2190 3 25948267 25949820 Lja3g2190 3 25948267 25949820 ECH