Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2189 ATGAGACGCTCTGCAGCCAAAAAAACGGGTCAATCCAATTCCACCCCTTCCGTCAATTCCTCCGCCGCGGATCTCTTCCGCTCCGCTTCAAGTAAAGCAAGCTCAAAGGAATCGGAAAGAATTGATAGTCTGTTTTATTCATATGCCAATGGATCTTCTAGTTTGATTGACCCAGAAGGAATTGAAACACTTTGTGCTGATATGGAGATAGCCCATACTGATGTGAGGATCTTGATGCTTGCATGGAAAATGAAAGCTGAGGAGCAAGGATATTTTACCTTGGATGAGTGGAGGAGAGGCTTAAAAGCACTAAGGGCTGATACAGTTAGTAAATTGAAGAAGGCCCTTCCAGACCTAGAAAAAGAGGTCAGGAGGCCATCAAATTTTGCAGATTTCTATTCTTATGCTTTCCAATATTGTCTAACAGAGGAGAAACAGAAAAGCATTGACACAGAGAGCATTTGTGAATTACTTGCTCTCGTTTTGGGTTCAACATTTCCAGCCCAAGTCAACTTATTTGTGGAATATTTGAAGGCTCAAGCTGATTACAAGGTCATAAACATGGATCAATGGATGGGATTTTTCCGGTTTTGCAATGAGATAAGTTTTCCATCACTTAATGACTATGATCCTGATCTTGCCTGGCCCTTGATCTTGGATAATTTCGTTGATTGGCTGCGAGCAAAGCAAACGTAA 696 0.4167 MRRSAAKKTGQSNSTPSVNSSAADLFRSASSKASSKESERIDSLFYSYANGSSSLIDPEGIETLCADMEIAHTDVRILMLAWKMKAEEQGYFTLDEWRRGLKALRADTVSKLKKALPDLEKEVRRPSNFADFYSYAFQYCLTEEKQKSIDTESICELLALVLGSTFPAQVNLFVEYLKAQADYKVINMDQWMGFFRFCNEISFPSLNDYDPDLAWPLILDNFVDWLRAKQT* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2189 231 MobiDBLite consensus disorder prediction 1 24 - -
Lja3g2189 231 Gene3D Cullin, PONY binding domain 126 231 IPR042460 -
Lja3g2189 231 PANTHER RP42 RELATED 1 230 IPR014764 -
Lja3g2189 231 Gene3D - 34 124 - -
Lja3g2189 231 ProSiteProfiles DCUN1 domain profile. 36 227 IPR005176 -
Lja3g2189 231 Pfam Cullin binding 111 225 IPR005176 -
Lja3g2189 231 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 1 230 - -
Lja3g2189 231 MobiDBLite consensus disorder prediction 7 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2189 Lja-Chr3 25938229 25943009 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2189 K17824 - gmx:100776788 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2189 3 25938229 25943009 Lja3g2189 3 25938229 25943009 ECH