Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2184 ATGTTAGCAGATATACACTTACCAGAGGAATGTTGGGAATGTGTCTTCAGATTCCTGAACCACCACCATTACTTGGAGTCTGTCTCCCTCGTCTCCAAGCAATTCCTCTCCATCACCAACCGCATCCGATCCACCCTCGCCATCCCCGACCCCACACTCCCTTTCCTCCCTCGCCTCCTCCACAGGTTCCCCAATCTCACCTCCCTTGACCTCACGCGCTTCCGCGGTGACCTCGACGCGCTTCTCCTCCAAATCTCGCGCTACCCCTTGCGCCGCCTCACATCCCTCGACGTCTCGCACCATCCAACGTTTCCGGCAAATGGGTTGCGAGGTTTGGCTGAAAAGATGAAAACGTTGACCTCTCTCACCTGTTCCCACATGGGTTCTCTCTCAATCGCCGACATTCTCCTCATCACCGATTGCTCCCCTTTCCTCCAAGAACTTGACCTTAGCTTCCCCAAGGAGGTTGTTCACCGCGGCAATAATCTGCCCCTGGCGCTTCCCAAGCTCCTTCGCAAGGTTAATCTCTCTGGCGAATCCTTCATCATCAACGACGAAGAGCTAATCAGAGTGTGCAAGAACTGTGAATTTCTCGAAGAATTGGTGATTTTCGAATGCCCTTTGATAACCCAGCATTGCTTCCGCGATCCGCCCGTTGTCAGTGCAAGCTTCATTGATTCGTTGGTGAGTTTGAAGAGCCTGACTTGTCTTCATTTTAAGGATTCGCGTATCTCGGATGAGTTGCTTTGTTCTGTTGCAGAGGAAGGTCTTCCTTTGAGGAAACTTGTCCTCGATGATTGCCGCAATTACACCTATGCTGGAATCTCTTGCTTGTTGTCAAGTTGTAAGTTTGTGCAGCACTTGGATCTTCAAAGTGCTGAGTTTCTGAATGATCAGCATGTAGCAGAGTTGTCTGTGTTTCTAGGTAATTTGATATCTATAGACATTAGTTACTGTAAGGGGCTCACAGATTTAGCCCTTTTTGCACTTATCAGGAACTGTTCTTTGCTTAGTGAGATCAAAATGAAGGTAACAGGGATTGGGAAAAAGAAGGTCCAGTATTCCAATTCTTTCATGAATTGTTGTGTGAAGTCTCTCCATTTGGGTTGGAATCCATATCTGGGAGATGAAAGCATCAAACTGTTGAGTTTGGTTTGCCCCAATATGCAGCTGCTTGACTTGAGATGTTGCAGTCGGATATCTGAAGGTGTTGTTGAAGTTTTAAGAAGATTCTGTACGATTAGGGATTTGAGCATAGGCCAATGTTTAGGAGTGAAGCTTCATGGTTTGAACTTTAAAGTTCCCAATGTGGAGGTGTTGAATTTGGCGCATTCAGGAATTGATGATGAAACACTCTCAGTGGTCGCAAAGAGTTTCTGTGGGCTTAAGTACCTGGACCTGGAATATTGTCGTAGTGTCACAGACAAGGGAGTGAGGAAAGTAGTAGAAAACTGCAAACAGCTGAGAGAGATAAATTTGCATGGTTGTTATAGAGTGGCTGGTAGTGTTGTTGCTTGGATGGTATTTTCAAGGCCAACATTGAGAAAGATAGTGGCTCCGCGTGATTTTCAATCAAGTGCCCGCCAGAGTGAACTCTTCTTGCGTCATGGATGCCGGGTTTGA 1623 0.4683 MLADIHLPEECWECVFRFLNHHHYLESVSLVSKQFLSITNRIRSTLAIPDPTLPFLPRLLHRFPNLTSLDLTRFRGDLDALLLQISRYPLRRLTSLDVSHHPTFPANGLRGLAEKMKTLTSLTCSHMGSLSIADILLITDCSPFLQELDLSFPKEVVHRGNNLPLALPKLLRKVNLSGESFIINDEELIRVCKNCEFLEELVIFECPLITQHCFRDPPVVSASFIDSLVSLKSLTCLHFKDSRISDELLCSVAEEGLPLRKLVLDDCRNYTYAGISCLLSSCKFVQHLDLQSAEFLNDQHVAELSVFLGNLISIDISYCKGLTDLALFALIRNCSLLSEIKMKVTGIGKKKVQYSNSFMNCCVKSLHLGWNPYLGDESIKLLSLVCPNMQLLDLRCCSRISEGVVEVLRRFCTIRDLSIGQCLGVKLHGLNFKVPNVEVLNLAHSGIDDETLSVVAKSFCGLKYLDLEYCRSVTDKGVRKVVENCKQLREINLHGCYRVAGSVVAWMVFSRPTLRKIVAPRDFQSSARQSELFLRHGCRV* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2184 540 PANTHER UNCHARACTERIZED 3 211 - -
Lja3g2184 540 SUPERFAMILY RNI-like 53 290 - -
Lja3g2184 540 Gene3D Ribonuclease Inhibitor 219 360 IPR032675 -
Lja3g2184 540 Gene3D Ribonuclease Inhibitor 4 218 IPR032675 -
Lja3g2184 540 SMART LRR_CC_2 308 333 IPR006553 -
Lja3g2184 540 SMART LRR_CC_2 90 115 IPR006553 -
Lja3g2184 540 SMART LRR_CC_2 459 484 IPR006553 -
Lja3g2184 540 SMART LRR_CC_2 386 410 IPR006553 -
Lja3g2184 540 SMART LRR_CC_2 256 281 IPR006553 -
Lja3g2184 540 Gene3D Ribonuclease Inhibitor 361 530 IPR032675 -
Lja3g2184 540 SUPERFAMILY RNI-like 223 500 - -
Lja3g2184 540 PANTHER NODULIN-LIKE PROTEIN 3 211 - -
Lja3g2184 540 Pfam Leucine Rich repeat 360 382 IPR001611 GO:0005515
Lja3g2184 540 Pfam Leucine Rich repeat 462 480 IPR001611 GO:0005515
Lja3g2184 540 PANTHER UNCHARACTERIZED 228 511 - -
Lja3g2184 540 PANTHER NODULIN-LIKE PROTEIN 228 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2184 Lja-Chr3 25803846 25805511 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2184 K10268 - gmx:100819538 563.148