Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2181 ATGGCTCTCCTCCTCCGCCTGAGAACACGAACCACAACCCCCTCTTTAACAACCCCTTCTCCATTCCACCACCGCCTCATTTCCACCTCCAGCTCCGGCGGCGGCGACGACGACGACCCCAAATCCAAATCTCCATTCGCATCCTATTTCAGAGACGTCAGGGACAAACTCAAGCAACGCCCACCCCCCTCCCCCTCCAACCCACCCTCCTCCTCCAACTCCAAAATGGCTTCCATCAATGAGATCATGGATAACCTCTCCGAGTTCCGTCGCCGGACCTCCGCGGCGGCGGCGCCGCCGCCGCAGCAGCAGCAATTCTCGTTCCAGAATCTCTACAATAAAAACGTGCTGGGGAAATCCGGCCAGTCCTCCGATTCCCAGCCCGCGAAGCCCGGCGGCCAGCATTCCTTTGACGCGATTCGCGACCGCTTGCAGCAGCTTGGCAGGGACCAACCGTCGAAGGGGGGGTTCTTGGGCTCGCCGAGACCGCCGAAGACCTCATTCGTCGGCGGGACGGGTGAGTTGCCGGAATCGGTGTTCGGCCGCGAGATGAGAGCAAGGGGGAGTGGGGGTGACTTTTACGCCAGGCCATATTCGCAACGAGACTTAGGGGAGAAGTTGGTGGCGTTGAGGCCTGAGGTGAAAGGAAAAGAGTGGTTTTCTATCGGGGAGTTGAATGAGAGATTGATGAAGTTGAGGGAGATGGAGATGAATGATGATAAGAGCAATTTGAGCAGTGCCATGATGGGAGCCCTGAGTAAGATAGATAAAGATGAAAAGTCAAAGAAACCTTCACTGCAGAGAATTGATATGTTGGGCCTGTTGGGTGGGACTCCAGACTATTTGTTGAAGCCTCCTAAAGAGCATCTTGTTGAAAAGTACTTCCATCCTGATAACTTGTCCTCTGCTGAAAAGTTGAAAATTGAGCTCACAAAGGTTAGAGATGAGTTTAAAATGTCGGAGTCAGATTGTGGTTCTGCTCGTGTCCAAGTTGCACAACTCACAACTAAGATTAAGCATCTATCATCAGTTCTGCACAAGAAGGATGTGCATTCTCGTAAAGGCCTGGTAGCAATGGTTCAGAAGAGAAAAAGTTTACTGAAATATCTCAGAAGAACCGACTGGGATTCCTATTGTTTTGTTATCTCTAAGCTAGGTTTACGTGATAATCCTGATTATAGTCACAAAATTCGGACTAAAGCTCAATCCAATGAGAAGGACCCTGGTCAGAAAAAGCGGTCTAAAGCTCGATCCAAAAAGAAGAAGACCGCCAAGGTGGCCGCCTAG 1287 0.512 MALLLRLRTRTTTPSLTTPSPFHHRLISTSSSGGGDDDDPKSKSPFASYFRDVRDKLKQRPPPSPSNPPSSSNSKMASINEIMDNLSEFRRRTSAAAAPPPQQQQFSFQNLYNKNVLGKSGQSSDSQPAKPGGQHSFDAIRDRLQQLGRDQPSKGGFLGSPRPPKTSFVGGTGELPESVFGREMRARGSGGDFYARPYSQRDLGEKLVALRPEVKGKEWFSIGELNERLMKLREMEMNDDKSNLSSAMMGALSKIDKDEKSKKPSLQRIDMLGLLGGTPDYLLKPPKEHLVEKYFHPDNLSSAEKLKIELTKVRDEFKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDVHSRKGLVAMVQKRKSLLKYLRRTDWDSYCFVISKLGLRDNPDYSHKIRTKAQSNEKDPGQKKRSKARSKKKKTAKVAA* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2181 428 MobiDBLite consensus disorder prediction 389 412 - -
Lja3g2181 428 Hamap 30S ribosomal protein S15 [rpsO]. 301 389 IPR005290 GO:0003735|GO:0005840|GO:0006412
Lja3g2181 428 Coils Coil 303 323 - -
Lja3g2181 428 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 420 - -
Lja3g2181 428 MobiDBLite consensus disorder prediction 149 176 - -
Lja3g2181 428 CDD Ribosomal_S15p_S13e 309 386 IPR000589 GO:0003735|GO:0005840|GO:0006412
Lja3g2181 428 MobiDBLite consensus disorder prediction 389 428 - -
Lja3g2181 428 MobiDBLite consensus disorder prediction 8 35 - -
Lja3g2181 428 MobiDBLite consensus disorder prediction 116 131 - -
Lja3g2181 428 Gene3D - 355 390 - -
Lja3g2181 428 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 420 - -
Lja3g2181 428 MobiDBLite consensus disorder prediction 36 59 - -
Lja3g2181 428 TIGRFAM S15_bact: ribosomal protein uS15 311 388 IPR005290 GO:0003735|GO:0005840|GO:0006412
Lja3g2181 428 MobiDBLite consensus disorder prediction 413 428 - -
Lja3g2181 428 MobiDBLite consensus disorder prediction 116 136 - -
Lja3g2181 428 SMART Ribosomal_S15_2 310 388 IPR000589 GO:0003735|GO:0005840|GO:0006412
Lja3g2181 428 Pfam Ribosomal protein S15 312 388 IPR000589 GO:0003735|GO:0005840|GO:0006412
Lja3g2181 428 Gene3D - 306 353 - -
Lja3g2181 428 MobiDBLite consensus disorder prediction 1 76 - -
Lja3g2181 428 SUPERFAMILY S15/NS1 RNA-binding domain 310 389 IPR009068 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2181 - - cam:101488736 392.889