Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2175 ATGTCTTCTTCTCTAAGAGCCACCATGTCATATAATTCTAAATCAAGCTTTGGTGAGCAACTATGGGTGATTCATATCCGGAAAACCCTCGAAGAAGAACTCGAGGACGATGGACAATATACTGTGTCCATCTTCAACGTGCCGAAGCTTCTTATGGCAAGTGATCCAGATTCTTATGTCCCGCAACAAATTGCAATCGGTCCGTACCACTATTGGCGTCCGGAGTTGTATGAGATGCAAAGGTACAAGCTTGCAGCAGCTAAAAGGTTCCAGAAACAGCTACAAGGCCACAAGTTAGACAACCTTGTTTGCCAATTGGAAAACTTGGAGCAGAGGATCCGAGGATGCTACCACAAGTTCTTGGATTTCAACTGCGAAACATTGGTGTGGATGATGGCGGTTGACGCCTTGTTCTTACTTGAGTTCCTTCAAGTCTTCGCCATACAAGAAGGTGCAAAGGTCCCTTTGGTTTCCTCTAGCATGTCTCATTTGGTGGACTATGCTGGCAAGAAATCAGCTCACAATGCAATATTGAGAGATTTTGTGATGCTTGAGAATCAAATCCCTTTGTTTGTTCTGAGAAAGATGCTGGAGTTGAAATTCTCATCACTGGAAACTGCAGATGAGACTCTTCTCTTGATGCTCATAGGGCTGTTTAAAGAGATTTCTCCTTTCAAGATGATTGAGGAGTTTCCAAACATTAATGTCTCAGAAAGTGCACACTTGCTTGATTTCTTGTATGATGTGATTGTTCCACAATTGGATCAGAAAATACCTGACATGATTGAAGTTGTGTTTGAACAAGAAGAGGAGCATCAAGGAAATGAAAAATCAAATGCTGAAATAGGCCAAGTCAAGCAATTCTTAAGTGAATTGTGGAATCTGCTTTCAAAATTGAACAAAGGGCCAGTGAGTTTGGTGAAAAAGGTACTTGTATCTAGACCTCTAAAACTCATAGTTAAGTTGCCTTGGAAAATTGTATCAAACATTCCAGGACTTAAACTTATGAAAGAACCTGTTGAGAATTTATTTTTCTCTCAAGAAAAAGGTGATGATGGCAAACCAGAAGATGAGAATTCAGGCTCGAAAAGTCTAATGAACAAGCCGCCCTCGATGGAGGAAATCACGATTCCATCTGTCACAGAGCTCTTGAATTCCGGGGTTCGTTTCTTGCCCGTCAAGGGAAGCATATCACAAATCAGCTTCGATGTGAAAACATGCTCGTTTTACCTTCCCATGGTCTGTTTGGACGTGAACACAGAACCTTTCCTGAGAAACATGGTTGCATATGAAGCTGCGGTTCGGTCTGGGCCATTGGTAATTACCCGTTACACCGAAATGATGAACGGGATCGTAGACTCAGAGGAGGATGCGAAGATTCTGAGAGAGAAAGGGATTATTCTGAGCCACTTGAAGAGTGATAAAGAGGTGGCTAACTTGTGGAATGGGATGAGCAAGTCGTTGAGATTGTCTAAGGTTCCATTCTTAGATAAGGTGATTGAGGATGTGAACAAGTATCATAACAGCAGATTGAAGGTTAAGATTTGGAGATTCATGAAGGTTTATGTGTTTAGTTCTTGGCAGTTTTTGACATTTATAGCTGCTATCTTCCTCTTGCTTTTGACAGCCATGCAATCCTTCTGCTCTGTCTATACCTGCAATCGCTTCTTCAACTCTGCGCTACAGCAAAAGCCAAGTAATTGA 1704 0.4178 MSSSLRATMSYNSKSSFGEQLWVIHIRKTLEEELEDDGQYTVSIFNVPKLLMASDPDSYVPQQIAIGPYHYWRPELYEMQRYKLAAAKRFQKQLQGHKLDNLVCQLENLEQRIRGCYHKFLDFNCETLVWMMAVDALFLLEFLQVFAIQEGAKVPLVSSSMSHLVDYAGKKSAHNAILRDFVMLENQIPLFVLRKMLELKFSSLETADETLLLMLIGLFKEISPFKMIEEFPNINVSESAHLLDFLYDVIVPQLDQKIPDMIEVVFEQEEEHQGNEKSNAEIGQVKQFLSELWNLLSKLNKGPVSLVKKVLVSRPLKLIVKLPWKIVSNIPGLKLMKEPVENLFFSQEKGDDGKPEDENSGSKSLMNKPPSMEEITIPSVTELLNSGVRFLPVKGSISQISFDVKTCSFYLPMVCLDVNTEPFLRNMVAYEAAVRSGPLVITRYTEMMNGIVDSEEDAKILREKGIILSHLKSDKEVANLWNGMSKSLRLSKVPFLDKVIEDVNKYHNSRLKVKIWRFMKVYVFSSWQFLTFIAAIFLLLLTAMQSFCSVYTCNRFFNSALQQKPSN* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2175 567 PANTHER UPF0481 PLANT-LIKE PROTEIN 3 554 - -
Lja3g2175 567 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 3 554 IPR004158 -
Lja3g2175 567 Coils Coil 92 119 - -
Lja3g2175 567 MobiDBLite consensus disorder prediction 346 370 - -
Lja3g2175 567 MobiDBLite consensus disorder prediction 346 361 - -
Lja3g2175 567 Pfam Plant protein of unknown function 44 541 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2175 Lja-Chr3 25578884 25580798 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2175 - - gmx:100806933 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2175 3 25578884 25580798 Lja3g2175 3 25578884 25580798 ECH