Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2170 ATGGCTCTGAGAACGGTGACTAGAAGGTTAGGGAAGAAACTCTTACCTTCCGCTTCCAGGCTACTACATTCTCATGCCACCAGTTTCGGGTTCAAACAGGTAAACGAAGACGAAAAGGCTCGCATGGTCGGCGACGTCTTCACGAGCGTTGCTGGGAAATACGATCTCATGAATGATCTGATGAGTGCTGGAATGCATAGATTGTGGAAGGAGAGGCTAGTTTCCATGCTGAATCCTTTTCCTGGAATGAAGCATCTTGATGTGGCTGGTGGCACAGGGGATGTTGCTTTTAGAATCTTGGAGAACATTAACAAAGTTAAGCAGAGAGGACCTCGAGATGTTAATGAAGATAGTTTAGAGGCGGAAACTAAGATATATGTATGTGACATTAATCCTAACATGTTGAATGTTGGCAAACAGCGGTCCGTGGAGATGGGTTTTGGCGAAGATAGTTCCCTTGAATGGGTGGAGGGAAATGCTGAAAGCTTGAGTTTCCAAAATGATTCAATGGATGGTTACACAATTGCGTTTGGGATAAGAAATGTTACGCACATAGAGAAAGTTCTTAGTGAAGCTCATAGGGTTTTGAAACACGGAGGAAGGTTCCTTTGCCTTGAACTAAGTCATGTTGATATTCCAGTATTTAAGGAACTGTATGACTATTATTCTTTCAAAGTTATTCCACTCATGGGAGAGCTGGTTTCCGGGGATAGGCAGTCCTATCAGTACTTGGTTGAGAGCATCCGGCGTTTCCCCCCACAGGAAAAATTTGCATCGATGATTGCAGATGCTGGGTTCCAGAAAGTAGAGTATGAGAATCTAGTTGGGGGAGTGGTTGCCATCCATTCAGGGCTCAAAATCTGA 864 0.4421 MALRTVTRRLGKKLLPSASRLLHSHATSFGFKQVNEDEKARMVGDVFTSVAGKYDLMNDLMSAGMHRLWKERLVSMLNPFPGMKHLDVAGGTGDVAFRILENINKVKQRGPRDVNEDSLEAETKIYVCDINPNMLNVGKQRSVEMGFGEDSSLEWVEGNAESLSFQNDSMDGYTIAFGIRNVTHIEKVLSEAHRVLKHGGRFLCLELSHVDIPVFKELYDYYSFKVIPLMGELVSGDRQSYQYLVESIRRFPPQEKFASMIADAGFQKVEYENLVGGVVAIHSGLKI* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2170 287 CDD AdoMet_MTases 84 204 - -
Lja3g2170 287 PANTHER METHYLTRANSFERASE 1 286 - -
Lja3g2170 287 TIGRFAM MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 43 286 IPR004033 GO:0008168
Lja3g2170 287 Pfam ubiE/COQ5 methyltransferase family 38 286 IPR004033 GO:0008168
Lja3g2170 287 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 34 286 IPR004033 GO:0008168
Lja3g2170 287 PANTHER 2-METHOXY-6-POLYPRENYL-1,4-BENZOQUINOL METHYLASE, MITOCHONDRIAL 1 286 - -
Lja3g2170 287 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 54 69 IPR023576 GO:0008168
Lja3g2170 287 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 33 281 IPR029063 -
Lja3g2170 287 Gene3D Vaccinia Virus protein VP39 49 287 IPR029063 -
Lja3g2170 287 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 38 286 IPR004033 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2170 Lja-Chr3 25464933 25469294 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2170 K06127 - gmx:100794692 502.671