Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2164 ATGGCTTCTAACTCAACCCTTCACTCACCAACCTACGGATCCGACCCAACAACCCCGAACACCACCTTCGTCCAAGCCGACCCATCAAACTTCCGTGCGGTGGTCCAGAAGCTAACCGGAGCATCAGAGGACCACGAGAAACTCCCCCTCACTCTCCCAGCCCGTCTGGCAGCCCAAACCCACCGCCCATCCTCCGCCACCACCGCCGTGGACACAATGGGCCCGAAGAAGCCCAACTTCAAGCTCCACGAGCGCCGTAATGCCGCGGCCTCGAAGAAGCTGCAGGAGCTGACCATCGGCGTCATGGAGAGGCCCGTGATGCTCACCGCCGCGAGCATGACGAGCGTGTCGCCGTCTTCCGGTTCGTACGTCCGGAGCATGATGATGGCTTCGCCGGTGTCGCAGCTGGAGTGGATGGCGCGTGGGAGTCCACGAACGCCGCATGAGGAGGAGGAGGAGCGGGCTATTGCCGGGAAAGGGTTCTACTTGCACCCAAGTCCTCTGTCCACTCCTAGAGCTTCTAACCCTCCTGAGCTATTGCCCCTTTTTCCTCTGCATTCTCCTTCTTCCACCAAAATTAATTCTCCTAATTCTTGCTCTTAA 603 0.5904 MASNSTLHSPTYGSDPTTPNTTFVQADPSNFRAVVQKLTGASEDHEKLPLTLPARLAAQTHRPSSATTAVDTMGPKKPNFKLHERRNAAASKKLQELTIGVMERPVMLTAASMTSVSPSSGSYVRSMMMASPVSQLEWMARGSPRTPHEEEEERAIAGKGFYLHPSPLSTPRASNPPELLPLFPLHSPSSTKINSPNSCS* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2164 200 MobiDBLite consensus disorder prediction 58 79 - -
Lja3g2164 200 MobiDBLite consensus disorder prediction 1 26 - -
Lja3g2164 200 MobiDBLite consensus disorder prediction 161 200 - -
Lja3g2164 200 PANTHER VQ MOTIF-CONTAINING PROTEIN 11 13 191 - -
Lja3g2164 200 Pfam VQ motif 18 44 IPR008889 -
Lja3g2164 200 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 13 191 IPR039611 -
Lja3g2164 200 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2164 Lja-Chr3 25353986 25354826 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2164 - - var:108320542 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2164 3 25353986 25354826 Lja3g2164 3 25353986 25354826 ECH