Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2161 ATGGTGTTTTCTGCAGTGTTCTCTCCCACTCTGAACCTCTCAGTGTCTTCCACCACCAACTGTTGTAGAAGAAGACCATTATCCACCACCACCACCAGAGTGACTATCAGAGCTAGCTCCACAGAGAAGGGTGAATCCAAGGACAATGATTCCCCAGCATTCAACCCTTTTGGCTTTGTCACTGACAACCCGTCAAGCAGAAGTGCTATTCAACTTCCTGAAAACCCTGCTGAGGATGGCAACGTTGGACAAATGCTAAATAGGACTGAAGGCAAGGGAAAGGATTTCGGGTCATATGTTAAATCTGGGAAGTTGAGATGGTTTGTGAGAGAAACTGGATCAGCAGAAAGCAGAAGAGGAACAATCGTCTTCCTTCATGGGGCCCCAATGCAATCTTTTGGTTACCGTGTTGTTATGTCTCAGTTGGCAGATGCAGGGTTCCACTGCTTTGCACCTGACTGGATTGGATTTGGTTTCAGTGACAAACCACAGCCAGGATATGGTTTTAATTACACAGAAAAGGAGTTCCATGACGCCTTGGATAATCTGCTTGAGGTGTTGGAGGTCAAATCTCCACTTTTCCTAGTTGTTCAGGGATTTCTTGTAGGCTCATATGGACTGACTTGGGCCCTGAAGAACTCAAGCAGGATATCAAAGCTAGCAATACTAAACAGTCCATTAACAGTTTCATCTGTCATTCCTGGACTATTTCAGCAGCTAAGATTTCCTCTACTTGGTGAATTTACATCCCAGAATGCTATTATTGCTGAGCGGTTTATTGAAGCAGGTAGCCCTTATGTTCTAAAAAATGAAAAAGCTGATGTGTACCGACTACCTTATTTGTCAAGCAGTGGACCTGGATTTGCTCTTCTTGAAGCTGCAAGAAAAACTAACTTCAAAGGTACTTTCAGTGAAATATCAGAAGGATTTGCAACTGGAAGATGGGATAAACCAGTAGTGCTTGTTTGGGGAATATCAGACAAGTACTTGCCCCAGTCTGTGGCAGAAGAGTTCCAAAAAGGAAACACAGAACACATCAAGCTTAAATTGATAGAAGGAGCTGGGCATATGCCACAAGAGGACTGGCCTGAGAAAGTTGTTGAGGCTTTGAGGTTCTTCTTCTGA 1125 0.4391 MVFSAVFSPTLNLSVSSTTNCCRRRPLSTTTTRVTIRASSTEKGESKDNDSPAFNPFGFVTDNPSSRSAIQLPENPAEDGNVGQMLNRTEGKGKDFGSYVKSGKLRWFVRETGSAESRRGTIVFLHGAPMQSFGYRVVMSQLADAGFHCFAPDWIGFGFSDKPQPGYGFNYTEKEFHDALDNLLEVLEVKSPLFLVVQGFLVGSYGLTWALKNSSRISKLAILNSPLTVSSVIPGLFQQLRFPLLGEFTSQNAIIAERFIEAGSPYVLKNEKADVYRLPYLSSSGPGFALLEAARKTNFKGTFSEISEGFATGRWDKPVVLVWGISDKYLPQSVAEEFQKGNTEHIKLKLIEGAGHMPQEDWPEKVVEALRFFF* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2161 374 PRINTS Alpha/beta hydrolase fold signature 319 333 IPR000073 -
Lja3g2161 374 PRINTS Alpha/beta hydrolase fold signature 210 223 IPR000073 -
Lja3g2161 374 PRINTS Alpha/beta hydrolase fold signature 146 161 IPR000073 -
Lja3g2161 374 Pfam Alpha/beta hydrolase family 122 369 IPR000073 -
Lja3g2161 374 PRINTS Epoxide hydrolase signature 351 373 IPR000639 GO:0003824
Lja3g2161 374 PRINTS Epoxide hydrolase signature 126 144 IPR000639 GO:0003824
Lja3g2161 374 PRINTS Epoxide hydrolase signature 146 161 IPR000639 GO:0003824
Lja3g2161 374 SUPERFAMILY alpha/beta-Hydrolases 98 374 IPR029058 -
Lja3g2161 374 Gene3D alpha/beta hydrolase 92 374 IPR029058 -
Lja3g2161 374 MobiDBLite consensus disorder prediction 27 55 - -
Lja3g2161 374 PANTHER HYDROLASE ALPHA/BETA FOLD FAMILY 95 373 - -
Lja3g2161 374 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 95 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2161 Lja-Chr3 25308908 25313483 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2161 - - gmx:100807417 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2161 3 25308908 25313483 Lja3g2161 3 25308908 25313483 ECH