Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2150 ATGGCTCTGATAACCTCCCAACCAAAAAATCCCATTCTCAAAACATACTTCACCACCATTCACCGTGCAATACCACAACGAAACAGAACCGTGGTTGGTCTCGGTTCCTTCTCTAACAACACCAATTTCAACAACAAAACTTGCAACTATGACTCAAAACCAATCCAAATTTCCCTGAAAAACAACCCCTTCACCTACAATCTACCCCTCATAGCAAAAGCCAATGCTGCATTGGGAGAAGCTTTGGAGCCAGAGCAGGGGAACTCAAAGCACAGGAAGATTTTACTCTCAGACGTGGAGGTGAAGAGAGAAAGGAGACTGTTCTTCGGTAGAAAATGGAACTCGCTGGATATTGGAACCGCTGCCATTGTTTTTGCCATGCACGTGCTCTGTTTGTTCGCTCCATTCCAGTTCAATTGGCAAGCTTTCTGGGTAGCCATGGCGCTATATGTTGTGACAGGGCTTTTTGGTATCACTCTGTCTTTTCATAGGAATCTTTCTCACAAGAGTTTCAAGCTTCCCAAATGGCTTGAATATACCTTTGCTTATTGTGGGGTTCTGGCTCTTCAGGGGAACCCAATTGATTGGGTCAGCACTCATCGGTACCATCACCAGTTCTGTGATTCTGAGAAAGACCCTCATAGCCCCATTGAAGGATTCTGGTTTAGCCATATGAGTTGGCTCTTTGATACCAATTCTATAGCAGAAAGGTGTGGAGAGCCAAACAATGTTGGTGATTTAGAGAAACAATCCTTCTATAGATTTATCCGAAGCACTTACATTGTCCATCCATTTGCATTGGGAGCTCTTCTATATGCCATAGGAGGATTTCCTTTCCTTGTTTGGGGAATGGGAGTGAGAATTGTTTGGGTCTACCACATAACTTGGCTTGTAAACTCAGCTTGCCATGTCTGGGGGGATCAGCCCTGGAACACAAGGGACTTATCCAGAAACAATTGGTGGGTAGCGGTGCTTGCTTTTGGTGAGGGTTGGCACAATAACCACCATGCTTTTGAGTACTCTGCTAGACATGGCCTAGAGTGGTGGCAACTAGACTTGACTTGGTACATGGTGAGATTTCTCCAAGCTATTGGGTTGGCCACTGATGTGAAGGTTCCTACTGAGAGTCAAAGGCAGAGAATGGCATTGAATAATGAATGA 1161 0.4488 MALITSQPKNPILKTYFTTIHRAIPQRNRTVVGLGSFSNNTNFNNKTCNYDSKPIQISLKNNPFTYNLPLIAKANAALGEALEPEQGNSKHRKILLSDVEVKRERRLFFGRKWNSLDIGTAAIVFAMHVLCLFAPFQFNWQAFWVAMALYVVTGLFGITLSFHRNLSHKSFKLPKWLEYTFAYCGVLALQGNPIDWVSTHRYHHQFCDSEKDPHSPIEGFWFSHMSWLFDTNSIAERCGEPNNVGDLEKQSFYRFIRSTYIVHPFALGALLYAIGGFPFLVWGMGVRIVWVYHITWLVNSACHVWGDQPWNTRDLSRNNWWVAVLAFGEGWHNNHHAFEYSARHGLEWWQLDLTWYMVRFLQAIGLATDVKVPTESQRQRMALNNE* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2150 386 CDD Delta9-FADS-like 139 371 IPR015876 GO:0016717
Lja3g2150 386 PANTHER ACYL-COA DESATURASE 68 384 IPR015876 GO:0016717
Lja3g2150 386 PRINTS Fatty acid desaturase family 1 signature 285 306 IPR015876 GO:0016717
Lja3g2150 386 PRINTS Fatty acid desaturase family 1 signature 328 342 IPR015876 GO:0016717
Lja3g2150 386 PRINTS Fatty acid desaturase family 1 signature 200 229 IPR015876 GO:0016717
Lja3g2150 386 PRINTS Fatty acid desaturase family 1 signature 163 183 IPR015876 GO:0016717
Lja3g2150 386 PANTHER BNAC05G37460D PROTEIN 68 384 - -
Lja3g2150 386 Pfam Fatty acid desaturase 143 359 IPR005804 GO:0006629
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2150 88 386 Lipid Metabolism Gene Families AT3G15850 74.667 8.96e-177 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2150 K20416 - gmx:100527024 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2150 3 25190844 25193115 Lja3g2150 3 25190844 25193115 ECH