Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2147 ATGATCTTCTCTTCCTCAAGCTCCTCCTTTCTCTGGCTTCTTCTCATCTTATTCTCTGTAACATTTTCTCACGTTTCAGGTTCATTCAAAGGAACATATGGAGTAAACTACGGTAGGATAGCAGACAATCTGCCATCCCCTGAAAGTGTGGTTACTCTGCTCAAAGCAGCAAAGATAAAGAACACAAGAATATATGATGCTAATCATGATGTTCTCACTGCCTTCAAAGGTTCAGGACTCGAAATCATCATTGGACTCCCTAACGAATTTCTGAAAGACATAAGCGTGGCTGAGGATCGCGCCATGAGCTGGATCAAAGAAAATGTCCAGCCATACCTTCCGGGGACCAAGATCGTCGGAATCGCGGTCGGAAACGAAATCTTGGGAGGCGGAGATATGATGCTCTGGGAAGTCTTACTCCCTGCAGCAAAAAACGTTTACAATTCCCTTGACAAGCTTGGTTTAACAAAACAAATTGAGGTATCAAGTCCACATTCAGAGGCAGTGTTTGCCAATTCATATCCTCCATCAGCATGCACTTTCAGAGATGATATACTCCCTTTTATGAAGCCTTTGTTGCAATTCTTCTCACAAATTGGAACTCCTTTCTACATAAATGCATACCCTTTTCTTGCATATAAGAATGACCCTCAGCACATTGACATCAACTATGCTCTCTTCAAGAAAAACCCTGGGATTTATGATGCTAAGACTAAATTGCACTATGATAACATGATTGATGCTCAAATTGATGCTGCTTATATTGCTCTGGAGAAGGTTGGGTTTGAGAAGATGCCGGTGATTGTTTCCGAGACAGGTTGGGCTTCTCGCGGGGACCCAGACGAAGCGGGAGCAAATGTGAAGAATGCGAAGACTTATAACAAGAATTTGAGGAAGAAGCTAATGAAGAAGAAGGGGACTCCTTATAGGCCAAAAATGCCTGTGAAGGCTTATATCTTTGCTTTGTTTAATGAGAATTTGAAGCCTGGTCCAACTTCTGAGAGAAACTTTGGACTGTTCAAACCAGATGGAAGTATTTCTTATGATATTGGCTTTACTGGGCTTAGGTCTTCTTCAGCAACCTCGTCTCTTCTTTCCTTCAAGGGTATTGAGTCATCATTGGTAATGCTCTGTGCAAGTTATGCTGCTCTTCTTCTTGTAGCATTGTAA 1170 0.4205 MIFSSSSSSFLWLLLILFSVTFSHVSGSFKGTYGVNYGRIADNLPSPESVVTLLKAAKIKNTRIYDANHDVLTAFKGSGLEIIIGLPNEFLKDISVAEDRAMSWIKENVQPYLPGTKIVGIAVGNEILGGGDMMLWEVLLPAAKNVYNSLDKLGLTKQIEVSSPHSEAVFANSYPPSACTFRDDILPFMKPLLQFFSQIGTPFYINAYPFLAYKNDPQHIDINYALFKKNPGIYDAKTKLHYDNMIDAQIDAAYIALEKVGFEKMPVIVSETGWASRGDPDEAGANVKNAKTYNKNLRKKLMKKKGTPYRPKMPVKAYIFALFNENLKPGPTSERNFGLFKPDGSISYDIGFTGLRSSSATSSLLSFKGIESSLVMLCASYAALLLVAL* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2147 389 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 9 378 IPR044965 GO:0004553|GO:0005975
Lja3g2147 389 Gene3D Glycosidases 32 358 - -
Lja3g2147 389 SUPERFAMILY (Trans)glycosidases 33 351 IPR017853 -
Lja3g2147 389 Pfam Glycosyl hydrolases family 17 34 352 IPR000490 GO:0004553|GO:0005975
Lja3g2147 389 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 9 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2147 Lja-Chr3 25127792 25130315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2147 23 366 Glycoside Hydrolase AT3G15800 75.429 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2147 - - gmx:100815468 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2147 3 25127792 25130315 Lja3g2147 3 25127792 25130315 ECH