Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2143 ATGGCTCCACCTGGTGGAAGATCCTGTCATCTACAATATCCACTCAAAGTTGCAATCACTGTGGTTTTCATCTTTTTCTCCCTGCTGCCTTCCAAATCTGGTGGGTTAGTGATGATGAACAACAGTGAGGATTTGGATGAAAGCAAAATGGCGATAGGCTCAAGGCCTCCAGCTTGTGTTAACAAGTGCAAGAATTGTAGGCCTTGCAGGGCAACCCTGGTTGTTCCAAATCACCAAAAAAGAAAAGGTTTCAAAGTATCATCTCATGGAGATGATGATACCTATTACCTTCTCTCATGGAAATGCAGTTGTGGGGATAAGCTCTTTCACCCATGA 336 0.4375 MAPPGGRSCHLQYPLKVAITVVFIFFSLLPSKSGGLVMMNNSEDLDESKMAIGSRPPACVNKCKNCRPCRATLVVPNHQKRKGFKVSSHGDDDTYYLLSWKCSCGDKLFHP* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2143 111 Pfam Epidermal patterning factor proteins 52 111 - -
Lja3g2143 111 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 13 111 IPR039455 GO:0010374
Lja3g2143 111 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 13 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2143 Lja-Chr3 25092588 25093373 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2143 - - gmx:102664177 172.555