Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2142 ATGGCTTTGGCACGTTTGGCTTTGAGAAATTTGCAGCAAAGGGTCTCTGCTTCTTCCTCTGCTCCCTTGATAAGGCATCATGGTAGTGTGGAGAAGCAGAGGTGGGGCAATGGGTTGGTGGCAAGGTTTTCCACTGCAGCGAGTGAGAAGGAGAAATCTGAAGGGAGTGAAGTTGCAGTCACGGAAGGTAAAAAGTCAAGGTTGTTCCCTAGGAGGAAGAGTAGGAGATGGCTTTGGAGAAATGATGACCGTGACTTCTCTCCTGCACTTCATGAGTTGTTTCCATCAAGCCTTGGGAATGCACTGATGCAAGCAACTGAGAACATCAACAAGCTATTTGACAACATGAATTTGACACCATGGTCTCTCAGCGGGCGCGTGAAAGAGTGGGATGACCATTACAAACTTCGTTATGACATGCCAGGAATTGCCAAGGAGGATGTAAAGATCACCATTGATGATGGGATGTTGACAATTAAGGGGGAGCACAAGGAAGAGAAAGAAGAAGGGGATGATGATGAGTATTGGTCTTCAAGTAGCTATGGCTACTATAATACCAGCTTGGTTTTGCCTGATGATGCCAAGGGTGATGAAATTAAGGCAGAGTTGAAGGATGGTGTGCTAACTGTGACTATTCCTAGAACTGAGAAGCCCAAAAAGGATGTGAAACAAGTGACTGTACAATAA 687 0.4556 MALARLALRNLQQRVSASSSAPLIRHHGSVEKQRWGNGLVARFSTAASEKEKSEGSEVAVTEGKKSRLFPRRKSRRWLWRNDDRDFSPALHELFPSSLGNALMQATENINKLFDNMNLTPWSLSGRVKEWDDHYKLRYDMPGIAKEDVKITIDDGMLTIKGEHKEEKEEGDDDEYWSSSSYGYYNTSLVLPDDAKGDEIKAELKDGVLTVTIPRTEKPKKDVKQVTVQ* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2142 228 Gene3D - 79 228 IPR008978 -
Lja3g2142 228 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 6 228 - -
Lja3g2142 228 CDD ACD_sHsps-like 127 214 - -
Lja3g2142 228 Pfam Hsp20/alpha crystallin family 128 228 IPR002068 -
Lja3g2142 228 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 112 228 IPR002068 -
Lja3g2142 228 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 6 228 - -
Lja3g2142 228 SUPERFAMILY HSP20-like chaperones 117 227 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2142 Lja-Chr3 25082962 25084297 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2142 K13993 - gmx:100787482 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2142 3 25082962 25084297 Lja3g2142 3 25082962 25084297 ECH