Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2134 ATGGTCGTTTTCTCTGTGAAACCCTTTTTCAGCATTCTCGTCGTCTCGCTCTCTCTCCTCTTCCTTCTCGCATTTCTATCGCCTCCTTCCCCTTTCTCCCTGAATCAGATTTCTCGGGAACCCTCACTAGGAGAGGTGGATATATGGAGTGTTCGGAGACTCATGGAATGGAGACCTTGCAATTGGTGGCTACAAGGGCCTCAAACAGCTCTTCCATTAGAGACCAATGGATATATCAGAGTGGATTGCTACGGGGGACTCAACCAGATGCGAAGAGATTTTTGTGATGGTGTGGGCATTGCTCGTCTGTTAAATGCAACTCTTGTCCTGCCGAAGTTTGAAGTAGCTTCATATTGGAATGAAACAAGTGGTTTTGCGGATGTATATGATGTAGACTACTTCATTCAGCAGATGAATGGCTTTGTCAAAGTCATAAAAGAGTTGCCCCCTGAGATTGCATCAAAAGAACCCGTTCAAGTGGACTGTAGCAAACGGAAAGGTCAATTTGATTATGTAGAAAGCGTTCTTCCATCTCTGTTGAAACACAAATACATTTCCATCACACCAGCAATGTCCCAAAGAAGGGACAGATACCCTTTGTATGCAAAAGCTTCTCTCTGTCAAGCTTGTTACAAGGCATTACGTCTCACCAGAGTGTTGGAAATGAAAGCCTCTAAGCTTCTAGATGCAATACCTAAACCCTTTTTGTCGCTTCATCTTCGTTTTGAGCCTGACATGGTTGCATACAGCCAGTGCCAATACCCAGGCCTTTCGCCTGCTTCCATCAAAGCCATAGAAGCAGCACAAGTGGACAGAAAACCATGGACTGGTGACTTAGCCCGCATATGGAGACAGCGGGGGAAATGTCCCCTTACACCTAATGAGACAGCTTTAATACTTCAAGCTCTTTCCATCTCACCAACCACAAATATATACTTGGCTGCTGGAGATGGTTTGATGGAAATTGAAGGGTTAACAGATACTTACACGAAAATATATACCAAGTCTAGTCTTCTCAGTGGGGAAGACTTCACTAGCATGCATGGCAATACAAAAGCTGCTTTGGATTATTATATATCTATTAATAGTGATTCCTACATAGCTACATATTTTGGAAACATGGACAAGATGGTTGCAGCAATGAGAGCTTTCAAAGGGTTGTACAAAACTATGTTTTTGAGTAGAAAAGGCTTTGCAGAATTAACTTCACGGGGTCTCAGGGGGAAGGAATTGATGCAAGCCCTATGGAAGGTTCACAGAGATGAGTTTGTCATGGGAAGAGGCTCTGCTCTGCCCGAGTGTTTTTGCGAATTCAAGTTGTGA 1323 0.4369 MVVFSVKPFFSILVVSLSLLFLLAFLSPPSPFSLNQISREPSLGEVDIWSVRRLMEWRPCNWWLQGPQTALPLETNGYIRVDCYGGLNQMRRDFCDGVGIARLLNATLVLPKFEVASYWNETSGFADVYDVDYFIQQMNGFVKVIKELPPEIASKEPVQVDCSKRKGQFDYVESVLPSLLKHKYISITPAMSQRRDRYPLYAKASLCQACYKALRLTRVLEMKASKLLDAIPKPFLSLHLRFEPDMVAYSQCQYPGLSPASIKAIEAAQVDRKPWTGDLARIWRQRGKCPLTPNETALILQALSISPTTNIYLAAGDGLMEIEGLTDTYTKIYTKSSLLSGEDFTSMHGNTKAALDYYISINSDSYIATYFGNMDKMVAAMRAFKGLYKTMFLSRKGFAELTSRGLRGKELMQALWKVHRDEFVMGRGSALPECFCEFKL* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2134 440 PANTHER O-FUCOSYLTRANSFERASE 13 4 439 - -
Lja3g2134 440 PANTHER OS02G0726500 PROTEIN-RELATED 4 439 - -
Lja3g2134 440 CDD O-FucT_plant 78 390 IPR024709 -
Lja3g2134 440 PIRSF UCP009360 3 439 IPR024709 -
Lja3g2134 440 Pfam GDP-fucose protein O-fucosyltransferase 78 384 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2134 Lja-Chr3 24957562 24960851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2134 66 410 Miscellaneous Gene Families AT1G22460 36.134 9.61e-61 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2134 - - gmx:100801207 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2134 3 24957562 24960851 Lja3g2134 3 24957562 24960851 ECH