Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2126 ATGGCGTCGTTCTCCGCCGCAACCGTTCCTCAAAACCTCACCTTCTCTTCCTCTAACAAACTCTCATTCTCTCTTCCACCTTCTTCTTCATCTTCATCTCACTTCCTCTCATTCCCCACTTCTCAACCAACCCTAACCACTCGCCTTATCACCTCTCACCAAATCCCACGCGCCCACGCTCCTCCTTCCGCCTCCGCCGCCGAATCCTCAACCTCATCCTTCCACGGCCTCTGCTACGTCGTCGGCGACAACATCGACACCGACCAGATCATCCCCGCCGAGTATCTCACCCTCGTCCCTTCCAACCCCGACGAGTACCAGAAGCTCGGCTCCTACGCCCTCATCGGCCTCCCCGCCTCCTACCCCGCCCGATTCGTCCAACCGGGAGAGACCAAGACCAAATACTCCGTCCTCATCGCCGGTGCCAATTTCGGCTGCGGCTCCTCCCGCGAGCATGCGCCTGTTGCGCTCGGAGCCTCCGGTGCTGCCGCTGTGGTGGCGGAGTCATATGCGAGGATCTTCTTCCGGAACTCGGTGGCGACTGGTGAGGTGTACCCGCTGGAGTCGGAGGGAAGGCTGTGTGAGGAGTGTAGCACTGGTGATGTGGTGACGATTGAGCTTGCGGAGAGCCGTTTGATTAATCACACCACCGGGAAGGAGTACAGTTTGAAGCCGATCGGCGACGCCGGTCCGGTTATTGAGGCCGGTGGCATCTTTGCCTATGCCAGGAAAACTGGCATGATTCCCACTCGTTGA 756 0.5899 MASFSAATVPQNLTFSSSNKLSFSLPPSSSSSSHFLSFPTSQPTLTTRLITSHQIPRAHAPPSASAAESSTSSFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYQKLGSYALIGLPASYPARFVQPGETKTKYSVLIAGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESEGRLCEECSTGDVVTIELAESRLINHTTGKEYSLKPIGDAGPVIEAGGIFAYARKTGMIPTR* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2126 251 Pfam Aconitase C-terminal domain 136 182 IPR000573 -
Lja3g2126 251 SUPERFAMILY LeuD/IlvD-like 74 248 - -
Lja3g2126 251 PANTHER BNAA05G34440D PROTEIN 32 250 - -
Lja3g2126 251 TIGRFAM LEUD_arch: 3-isopropylmalate dehydratase, small subunit 78 244 IPR011827 GO:0016836
Lja3g2126 251 CDD IPMI_Swivel 80 207 IPR033940 -
Lja3g2126 251 Gene3D Aconitase, domain 4 71 247 IPR015928 -
Lja3g2126 251 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 32 250 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2126 K01704 - gmx:100809737 338.961