Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2122 ATGGTGAAGGAACATGTTCTCACAGCTTTCACTCCTAATGGTGACTACGTGGCTATTCTGTCTGTCGATGGGACGGCCAAAGTTTGGAACACTGACAGTGGAAATTTGTTAGCAGAGTGGAAGCCATCTGATGGAGATCATGAAATTAATTATTCTTGTATTGCGTGTAGTTTTATTGGGAAAAAGCGTAGGAAAGAACAGGGAACTTGCTTATTAGCTCTTGGCACAGTTGATGGAAGTATTCTGGCTGTTGATGTTTCCACCAGTGAGAGAAAGTGGACTACTAGCCATCCTGGGGGGGTTTGTGGACTTTCATTTGCAAATAAAGGACGTCTTCTTCGCATTGTTGGACATAATGGGATGGCATCTGAGATTAATACTGAGACAGGAGAGCTTTTAAAGGAGTTTAGAATCTCAAAAAAGACCATCTCTTATGTGGCTTTCTCACGTGATGAAAATTATTTAGCTATTGTCGGCACTAAACCACGAGTTATAAGCTGGGAAAATGGGAAAGAGGTTCTGAAGTTCCCTACTGAATTGGTAAATGTGCAGTATGTTTCTATATCCAATGATGCCGAAGATTTAGTTACATTAGATGTTGAGGGTAAACATCTTCAAGTTTGGAGGTGCGATTTAAATTCAGGAACTGTGAGTAGTGGTCCTACACTTCCCGTGAGGCATTCTCCATTAGTTTTTGAATGCCATCGTGGTTGCAATAAAGAAGATGACTTAGCTGTCTTGGCAGTTACGGGGTCAGGGGCAGCCTTTATGTGGAATTTGAATTTGAAAGCCTCTTCTGAAGATCAGATAAAACCAACTAAAGTTACCGCAAAGATGAAAAAAGTTGAAACCAATATGGAAAACAGTGAAAGTTCAAAAAAAAGGCGGACTCCAATCATTGCATCCAGATTACAACCTGTTGGGGAAGACAAACAGATAAAAGCTCTTGTAACTTATGGTTCTATAGATCATCCACATTTTACTGTCTTAAATGTTGGCAACTCAGGGGAGGATATAGTATTAGATGTTGGAGAGGAGAGTGATTCTGTTCAGAAGCATGACAATCCTTCTAACAAAGAAGTACCAATGGAAAGCAAGAAGTCTAAGAAAAGACACGCAACATCTGATCCTGATCTCCCAGCCACGACTAACAAGGTGGATTCTGATCAATGTGAGACCGCAGAAGGAGTGCTTGTTGATGATGATTTATGCGAGCCAACAATGGGAGAGAAACTTAGCAGTCTCTCTTTGCTGGATGATAACAAATCCAGGAGTGATGAAGAGCAAGCATTGACTGCCTCAGCAAAGCCTCCAAGTGCAGACTCTGTGGATGTTTTGCTTAAGCAAGCATTAAATGCTGATGATCGTGCCCTTCTTCTGGATTGCTTGGACACGCAAGAGGAGAAGGTTATTAAAAAGTCAGTTGCACAGTTGAACCCATCCAACGTTCTCAAACTTCTACACTCTCTCATATACATTATTGAATCTAGGGGTGCGATTTTGGCATGTGCTCTTCCATGGCTGAAATGTCTACTTCTACAGCATGCAAGCGGCATAATGTCCCAGGAATCTTCCTTAAAAGATTTGAACTCTTTGTATCAATTGATTGAGGCTAGAGTCTCCACTTTTAAACCTGCAGTACAACTGTCAAGTTGCATGGACATTCTTTACTCAGGGGTTATTAACGAGGAGGTAGATGAAGTTGAAACAGTGCCAGTTATCTTTGAGGACAAAGATGATAGTGAAGAAGATGAATCTGAGGATGATGATGCCATGGAAACTGACCAAGACAGCAAAGATGAAGAAGCATTTGATGATGTTAGTGACATTGAAGGAAATGATGATATCATGGAAGATTGA 1860 0.4097 MVKEHVLTAFTPNGDYVAILSVDGTAKVWNTDSGNLLAEWKPSDGDHEINYSCIACSFIGKKRRKEQGTCLLALGTVDGSILAVDVSTSERKWTTSHPGGVCGLSFANKGRLLRIVGHNGMASEINTETGELLKEFRISKKTISYVAFSRDENYLAIVGTKPRVISWENGKEVLKFPTELVNVQYVSISNDAEDLVTLDVEGKHLQVWRCDLNSGTVSSGPTLPVRHSPLVFECHRGCNKEDDLAVLAVTGSGAAFMWNLNLKASSEDQIKPTKVTAKMKKVETNMENSESSKKRRTPIIASRLQPVGEDKQIKALVTYGSIDHPHFTVLNVGNSGEDIVLDVGEESDSVQKHDNPSNKEVPMESKKSKKRHATSDPDLPATTNKVDSDQCETAEGVLVDDDLCEPTMGEKLSSLSLLDDNKSRSDEEQALTASAKPPSADSVDVLLKQALNADDRALLLDCLDTQEEKVIKKSVAQLNPSNVLKLLHSLIYIIESRGAILACALPWLKCLLLQHASGIMSQESSLKDLNSLYQLIEARVSTFKPAVQLSSCMDILYSGVINEEVDEVETVPVIFEDKDDSEEDESEDDDAMETDQDSKDEEAFDDVSDIEGNDDIMED* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2122 619 MobiDBLite consensus disorder prediction 571 619 - -
Lja3g2122 619 Gene3D - 7 300 IPR015943 GO:0005515
Lja3g2122 619 ProSiteProfiles Trp-Asp (WD) repeats profile. 9 39 IPR001680 GO:0005515
Lja3g2122 619 MobiDBLite consensus disorder prediction 281 297 - -
Lja3g2122 619 SUPERFAMILY WD40 repeat-like 9 218 IPR036322 GO:0005515
Lja3g2122 619 Pfam Dip2/Utp12 Family 455 556 IPR007148 -
Lja3g2122 619 MobiDBLite consensus disorder prediction 346 389 - -
Lja3g2122 619 MobiDBLite consensus disorder prediction 576 619 - -
Lja3g2122 619 MobiDBLite consensus disorder prediction 346 376 - -
Lja3g2122 619 PANTHER WD REPEAT-CONTAINING 61 617 - -
Lja3g2122 619 MobiDBLite consensus disorder prediction 281 300 - -
Lja3g2122 619 MobiDBLite consensus disorder prediction 414 437 - -
Lja3g2122 619 PANTHER OS01G0649000 PROTEIN 61 617 - -
Lja3g2122 619 Pfam Anaphase-promoting complex subunit 4 WD40 domain 71 149 IPR024977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2122 Lja-Chr3 24834285 24840098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2122 K14546 - gmx:100796828 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2122 3 24834285 24840098 Lja3g2122 3 24834285 24840098 ECH