Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2105 ATGGACTCAGAAACCACTCGAAAGCTTCCTGTTATTGACTTCACTAATCTCAATAATTTGAGAGGCAGCAGTCCTAATTGGGAGGCAGTGAAATCCAAAGTTCACAAGGCACTAGTAGACTATGGTTGCTTTGAAGCAATTTTTGATAAAGTTCCTATAGATCTTCGCAAGGAAATATTTGGTGCACTAGAAGAGGTGTTTGATCTCCCTCTACAAACCAAGCAACTCAACGTGTCTAAGAAGCCCTTTCATGGTTACTTTGGACAGCATCCTGTGATCCCACTTTTTGAGAGCATGGGCATTGATGATGCAAATGTCTCTGAAAAAGTAGAAAACATGACCAAAATCTTGTGGCCTGATGGAAACCCAAGTTTTAGCAAAACAATAAATTCATTCTCTGAGCATGTATCAGAGTTGGACCAGATTATTAGGAAGATGGTTTTGGAGAGCTTGGGTGTTGAACGGTACTTGGATGAGCACTTAACCAATTTGGACAAAAACATTGTGACCATATTGTACCAAAATCAAGTGGAGGGTTTGGAGGTGCTGACCAAAGATGGCGAATGGTTAAGCTACAAGCCTTCCCCAGAAAGTTTCTTTGTTGTGATTGGTGAAGCTCTCCATGCATGGTCAAATGGGAGGTTGCATTCACCCTTTCACCGAGTGATGATGACGGGGAACGAAGCTAGATACTCTACATGGCTGTTCTCCGTTCCCAAGGGAGGGTACATTATAAAAACCCCGGAGGAGCTGGTGGATGAGGAGCACCCTCTTCTGTTTAAGGGTTTTGATTATGCTGAGTTTGTCAAGTATTATCAAACTGAAGAAGGCAAGAGAGATCAGTTTGCTCTGCGCACTTACTGTGGAGTTTGA 873 0.4273 MDSETTRKLPVIDFTNLNNLRGSSPNWEAVKSKVHKALVDYGCFEAIFDKVPIDLRKEIFGALEEVFDLPLQTKQLNVSKKPFHGYFGQHPVIPLFESMGIDDANVSEKVENMTKILWPDGNPSFSKTINSFSEHVSELDQIIRKMVLESLGVERYLDEHLTNLDKNIVTILYQNQVEGLEVLTKDGEWLSYKPSPESFFVVIGEALHAWSNGRLHSPFHRVMMTGNEARYSTWLFSVPKGGYIIKTPEELVDEEHPLLFKGFDYAEFVKYYQTEEGKRDQFALRTYCGV* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2105 290 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 5 162 - -
Lja3g2105 290 SUPERFAMILY Clavaminate synthase-like 6 275 - -
Lja3g2105 290 Gene3D - 1 165 IPR027443 -
Lja3g2105 290 Pfam 2OG-Fe(II) oxygenase superfamily 162 235 IPR044861 -
Lja3g2105 290 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 88 IPR026992 -
Lja3g2105 290 Gene3D - 166 271 IPR027443 -
Lja3g2105 290 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 164 289 - -
Lja3g2105 290 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 164 289 - -
Lja3g2105 290 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2105 Lja-Chr3 24551372 24552755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2105 8 272 Glycosyltransferase AT5G59530 21.711 4.66e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2105 - - gmx:100784444 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2105 3 24551372 24552755 Lja3g2105 3 24551372 24552755 ECH