Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2059 ATGAGCATGCCGCGGCCGAGCCAGGTCACAGTCAGAGACCTCGCCGAGGAAGCCAAGAAACGGATTGTCATCCTCATCGTCTGCGTCGTCGGACTCTCCTATCTCATGTCCTTGACAAGCTCCTCAGTTTGGGTCAACTTGCCAGCTGCTGCCTCCTTAATTATCGCTTTCCGTTATTTATCACTAGATTTTGAAATGAAGAGAAAAGCTGCAGCATACAACAATAAAGCAGGCTTCACCAGTGCTCAGTCTTCAAAGATACCTATTGAAAATGCTAAAGCTGTTACGAAGTTTGACTGGAGAAAAAAAGTGAATTCTCCTGTTGTTGAGGATGCGATTGATCACTTCACCAGACATCTGATTTCTGAATGGGTAACAGACCTTTGGTACTCTCGCTTAACACCAGACAAGGAGGGTCCTGAAGAGTTAGTGCAAATAATTAATGGTGTTCTTGGGGAAATTTCAGGGCGCATGAGAAATATAAATCTGATTGATTTTTTGATAAGGGATCTTATTCATCTCATTTGCACCCACTTGGAGCTGTTTCGTGCTGCTCTCTCAAAGATTGAAAAACAAGGCACAGGTTCATTAACATTTGAAAGTCGAGATATGGAACTAAAGGTTACCTTGGCTGCAGAGAACAAATTGCATCCCGCTTTATTTTCTACTGAAGCTGAGCATAAGGTTCTGCAGCATCTGATGAGTGGTCTCATGTTTGTTACTTTCAAGTCTGAGGATTTGCACTGTTCTTTCTTTCGATATGCCGTCAGGGAGCTTCTTGCATGTGCTGTAATACGACCTGTCTTAAACTTGGCCAATCCAAGATTTATTAACGAAAGAATTGAATCTGTGGTAGTTAACAAGACTAAGGTTAACAAGGGGGTTTCTACAGCTCAAGAGGGATCCCATGCTAAAGTAGATGAGTTACAGACTTCGTCTGACCATTTTTCCAAGTGTTTAGATCCTTCTGCTACTGGTGTCGAGCTTGTGCAGCTAAGAAATGGTCAATCCAAAAATGCAGTGTCATCTACAGAAAATAAATCTCGTGATAATATTGCTAAAGATCCATTGCTTTCAATTGATGCTCGGTCTTCCCGCTCATGGAACTCTTTGCCTGCAAACTCAGAACCTAATGATGACCAAGGTATTCAACGATATCGCTCAGGAGGAGAGTGGGGAGATATTTTAGATGTCATTTCTCGCAGAAAGACCCAAGCTCTTGCTCCAGAACACTTTGAGAATGTGTGGACAAAGGGGAAAAATTACAAGAAAAAAGATGGTGAAAACCAATCAAATGAGCAAGTCCCGCAGCATCCTGCGATAGGAAAATCACTAAAGGTAGATCATATGAAGTCGATATCTGGACCCAAAGAAAAAGAGACTAACTCCAAGTTTAATCCTAAGGGCCACATTAATTCTGGATACAACAGTCCAATCACTGCTAAAAATGCACCTTTTCATGCAGACAAGAATGGATCAACTTGTTCTTCAGTGACGTCGTATAAAGATGATGAGAACAACCACATTTATATGCAAACAAGTGAATCTGAGAGCAATACTTCTTATACTTCTGAAGATGATGAAACTAACACTGTCACCGGTCTTGATTCTCCAGTAACTAAGGTTTGGGATGGAAGAAGTAATAGAAACCAGGCTGTTTCTTATGTTCATCACCCACTTGAAAATGTTGATAATCATGGTAGAAAGAAGAGGAATAAGAGCCATTCTCGCAATCCAAGATTATCCAGAACCCAATCTGGAAGTAAAAGGTCTCGGTTCGGTGGTAATAAATTACCTACGTGGCAAGAAGTTGAGAGAACAAGCTTTGTATCTGGAGATGGTCAAGACATACTCAGCACTTCAAAATCACAGGTGAATTCTGAGGAGTCCAGTGATGATGCTGATATTGAAAGTTTGGGTAGAATATATAGTGGAGCAGCTGCGTCTTCTTCTGCATACTCTATTTCTCAATCAGAATCTTCTAGTCTGGCTGTTAATCCCCTGAAAAGTTCCTCTGCCGTAGATTCCTTTTACAAGTTGAAATGTGAGGTCTTGGGTGCAAATATTGTGAAGAGTGGCTCAAGAACTTTTGCTGTTTACTCCGTATCTGTTACGGATGTAAATAACAACAGTTGGTCAATTAAAAGGAGGTTTCGCCATTTTGAGGAGCTACATCGACGCTTGAAAGAGTTCGCTGAGTATAATCTTCATCTTCCACCAAAACATTTTCTGTCAACTGGTTTGGATGTACCGGTCATTCAAGAGCGTTGTGAATTGCTTGATATATATTTGAAGAAACTTATGCAGCTACCAACAATTTCAGAATCAATTGAAGTGTGGGACTTTCTGAGTGTTGACTCTCAGACGTACATATTCTCAAGTTCTTTTTCTATCATGGAGACGTTATCAGTTGGCCTGCATGCTAAGCCATCTGAGAAGACTAAAAGCAGTTCCCACTTATCTTTACCTGGAAGTGACCCTTCTGCCTTTCGGAGAGAAAACTATAGTCTGGAAAGTAAAGAGGCTGTTGTGCGAACAAGAAATAATGTTGTGACTGATGGATTGAAGCCAAAAGTAAATAGCATGCCTCTTTCGCTACCAAAAAGGAGTGGTTTGGAATCTAGAAAGTCACCTGACAATTCTGGCAGCAATACAGATTTTCTAGCAAGAAAGAATGCACCTTCTCCCAATAACTTGCACAAGACAGTGAGAGGAAGAGATAGTTCGGATGAGGTTGCTGAGGCGCACCATGATACTTCTGACTCTATTCCTACGGAGTGGGTCCCACCAAATTTGAGTGCACCCATATTGGATCTGTTGGATGTTATCCTCCAGCTTCAAGATGGTGGATGGATTAGGCGGAAGGCTTTTTGGGCTGCTAAACAAATCTTACAACTAGGAATGGGCGATGCCTTTGATGATTGGTTGATAGAGAAAGTTCAGCTTCTTCGTAAGGGATCAGTGATTGCTTCAGGGGTCAAGCGAGTTGAGCAAATACTCTGGCCTGATGGAATATTCTTAACAAAGCATCCAAATCGACGACCACCACCTTCTAGTCCATCTCAGAACTCACCTCATGGTCACCAACCTACACAAGTGTCTTCTCCGACGATGAGCGATGAGCAGAAACAGGAGGCAGATCGGCGTGCCAAGTTTGTATATGAGCTAATGATTGAAAATGCACCACCTGCAATCGTAAGTCTTGTTGGTCGAAAGGAGTATGAGCAATGTGCTAGGGATCTATATTTTTTTCTTCAGTCTTCTGTTTGCTTGAAGCAGCTGGCTTTTGACATCCTGGAGCTGCTGCTGCTGGCAGCATTTCCAGAACTTGATGATGTATTTAAGCAGCTGCATGAAGAAAAACATAAATTTGGCGAGCTCAAAACAGAGTAA 3393 0.4188 MSMPRPSQVTVRDLAEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLIIAFRYLSLDFEMKRKAAAYNNKAGFTSAQSSKIPIENAKAVTKFDWRKKVNSPVVEDAIDHFTRHLISEWVTDLWYSRLTPDKEGPEELVQIINGVLGEISGRMRNINLIDFLIRDLIHLICTHLELFRAALSKIEKQGTGSLTFESRDMELKVTLAAENKLHPALFSTEAEHKVLQHLMSGLMFVTFKSEDLHCSFFRYAVRELLACAVIRPVLNLANPRFINERIESVVVNKTKVNKGVSTAQEGSHAKVDELQTSSDHFSKCLDPSATGVELVQLRNGQSKNAVSSTENKSRDNIAKDPLLSIDARSSRSWNSLPANSEPNDDQGIQRYRSGGEWGDILDVISRRKTQALAPEHFENVWTKGKNYKKKDGENQSNEQVPQHPAIGKSLKVDHMKSISGPKEKETNSKFNPKGHINSGYNSPITAKNAPFHADKNGSTCSSVTSYKDDENNHIYMQTSESESNTSYTSEDDETNTVTGLDSPVTKVWDGRSNRNQAVSYVHHPLENVDNHGRKKRNKSHSRNPRLSRTQSGSKRSRFGGNKLPTWQEVERTSFVSGDGQDILSTSKSQVNSEESSDDADIESLGRIYSGAAASSSAYSISQSESSSLAVNPLKSSSAVDSFYKLKCEVLGANIVKSGSRTFAVYSVSVTDVNNNSWSIKRRFRHFEELHRRLKEFAEYNLHLPPKHFLSTGLDVPVIQERCELLDIYLKKLMQLPTISESIEVWDFLSVDSQTYIFSSSFSIMETLSVGLHAKPSEKTKSSSHLSLPGSDPSAFRRENYSLESKEAVVRTRNNVVTDGLKPKVNSMPLSLPKRSGLESRKSPDNSGSNTDFLARKNAPSPNNLHKTVRGRDSSDEVAEAHHDTSDSIPTEWVPPNLSAPILDLLDVILQLQDGGWIRRKAFWAAKQILQLGMGDAFDDWLIEKVQLLRKGSVIASGVKRVEQILWPDGIFLTKHPNRRPPPSSPSQNSPHGHQPTQVSSPTMSDEQKQEADRRAKFVYELMIENAPPAIVSLVGRKEYEQCARDLYFFLQSSVCLKQLAFDILELLLLAAFPELDDVFKQLHEEKHKFGELKTE* 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2059 1130 Gene3D - 678 794 IPR036871 GO:0035091
Lja3g2059 1130 SUPERFAMILY PX domain 679 787 IPR036871 GO:0035091
Lja3g2059 1130 MobiDBLite consensus disorder prediction 512 598 - -
Lja3g2059 1130 SMART PXA_3 110 289 IPR003114 -
Lja3g2059 1130 MobiDBLite consensus disorder prediction 903 921 - -
Lja3g2059 1130 SMART PX_2 682 786 IPR001683 GO:0035091
Lja3g2059 1130 MobiDBLite consensus disorder prediction 466 480 - -
Lja3g2059 1130 Pfam PX domain 709 786 IPR001683 GO:0035091
Lja3g2059 1130 MobiDBLite consensus disorder prediction 362 382 - -
Lja3g2059 1130 MobiDBLite consensus disorder prediction 512 555 - -
Lja3g2059 1130 MobiDBLite consensus disorder prediction 450 465 - -
Lja3g2059 1130 PANTHER PHOX (PX) DOMAIN-CONTAINING PROTEIN 7 1127 - -
Lja3g2059 1130 MobiDBLite consensus disorder prediction 421 500 - -
Lja3g2059 1130 MobiDBLite consensus disorder prediction 579 598 - -
Lja3g2059 1130 MobiDBLite consensus disorder prediction 1024 1040 - -
Lja3g2059 1130 MobiDBLite consensus disorder prediction 612 634 - -
Lja3g2059 1130 Pfam PXA domain 106 283 IPR003114 -
Lja3g2059 1130 ProSiteProfiles PXA domain profile. 106 285 IPR003114 -
Lja3g2059 1130 MobiDBLite consensus disorder prediction 1010 1044 - -
Lja3g2059 1130 MobiDBLite consensus disorder prediction 876 902 - -
Lja3g2059 1130 PANTHER PX SERINE/THREONINE KINASE PXK 7 1127 - -
Lja3g2059 1130 Pfam Sorting nexin C terminal 951 1088 IPR013937 -
Lja3g2059 1130 MobiDBLite consensus disorder prediction 854 924 - -
Lja3g2059 1130 MobiDBLite consensus disorder prediction 335 387 - -
Lja3g2059 1130 ProSiteProfiles PX domain profile. 678 790 IPR001683 GO:0035091
Lja3g2059 1130 MobiDBLite consensus disorder prediction 612 627 - -
Lja3g2059 1130 MobiDBLite consensus disorder prediction 810 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2059 Lja-Chr3 23911242 23919051 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2059 K17925 - gmx:100778731 1757.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2059 3 23911242 23919051 Lja3g2059 3 23911242 23919051 ECH