Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2048 ATGGCTTCTCTTGCTACCTTAGCTGCTGTTCAACCAGCTGCAATCAATGGTCTTGCTGGAAGTTCCCTTAATGGAACTAAGCTCTCCTTCAAGTCCTCTCGCCAGAGCATCAAATCCAAGAACTTCAGCAAACATTGCAGGAATGGTGCTGTGGTAGCAAAGTATGGTGACAAGAGTGTGTACTTTGATTTGGAGGATATTGGTAACACTACAGGACAGTGGGACTTGTATGGTTCAGATGCACCTTCACCTTACAACTCTCTTCAGAGCAAGTTCTTTGAGACATTTGCTGCTCCATTCACAAAGAGGGGATTGTTGCTCAAGTTTCTGATCTTGGGAGGTGGTTCCACCCTCGCATACTACAGTGCCACAGCTTCTGGTGACATTCTACCAATCAAGAAGGGCCCTCAACTTCCACCAAAGCTCGGTCCTCGTGGCAAGATCTAA 447 0.4676 MASLATLAAVQPAAINGLAGSSLNGTKLSFKSSRQSIKSKNFSKHCRNGAVVAKYGDKSVYFDLEDIGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYYSATASGDILPIKKGPQLPPKLGPRGKI* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2048 148 Pfam Photosystem I reaction centre subunit VI 7 148 IPR004928 GO:0009522|GO:0009538|GO:0015979
Lja3g2048 148 Gene3D - 102 124 - -
Lja3g2048 148 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC-LIKE 1 148 - -
Lja3g2048 148 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC 1 148 IPR004928 GO:0009522|GO:0009538|GO:0015979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2048 K02695 - gmx:100499832 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2048 3 23820396 23822315 Lja3g2048 3 23820396 23822315 ECH