Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2047 ATGTTGGAATTGAACGTCCCTGATTCTGTGGCTCATTTGCTAATCCACTCATCCTTTGCAGCGCTACATCAATCAAATACACGAACTTTGAAGGTGCAAATGGCTTCCATTGCTGCGAGCTTGCAGCCACCATTGCTGCTCCATGGTAGAAAATCACATACAGGAAACTTCCCAAGTTTCCCTGTTTCTCTTCTTCCAGGAAGACGGAATCTTATTGCTTTGGTTGTGAAGGCTTCCGGAGAAAGTTCTGAATCTTCGACTTCCCTAACTGTTTTACAGTCAGTTCAGAATGTTTGGGATAAACCTGAGGACCGGCTGGGACTAATTGGTTTTGGCTTTGCTGGTATAGTAGCACTTTGGGCATCAGCAAATTTGATCACGGCCGTCGACCAATTGCCAGTTCTTCCAACTGTACTGGAATTGATTGGAATTCTATTCTCCGTATGGTTTACTTATCGCTATCTCTTATTCAAGCCTGACCGGGAAGAGCTTTTTCAAATCTTGAACAAGTCAGTGTCAGATATCTTGGGCCAGTAA 537 0.4395 MLELNVPDSVAHLLIHSSFAALHQSNTRTLKVQMASIAASLQPPLLLHGRKSHTGNFPSFPVSLLPGRRNLIALVVKASGESSESSTSLTVLQSVQNVWDKPEDRLGLIGFGFAGIVALWASANLITAVDQLPVLPTVLELIGILFSVWFTYRYLLFKPDREELFQILNKSVSDILGQ* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2047 178 PANTHER PROTEIN CURVATURE THYLAKOID 1C, CHLOROPLASTIC 34 178 - -
Lja3g2047 178 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 93 177 IPR025564 -
Lja3g2047 178 PANTHER - 34 178 IPR033344 GO:0009579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2047 Lja-Chr3 23817459 23819952 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2047 - - lja:Lj0g3v0300909.1 334.339