Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2046 ATGATTCTGCAGAAGCCTGTGGAAAGTTACTCTCTTGCAGGTTTATATCGTTTCGCCATGAGGGGGCGTCAGCGAGTAGCATCCAGGGAATACATGTATGGGAATGATAAAGAACAAAATCCAGCTTCAATGCGTTTACTGAATGCCAAACCTAGTTGGCGGCGTTCTTTGCGGCATGTAATAGTGGCTTCTATTTCCTCATTCTTATATGGCTACCATATTGGAGTAGTCAATGAAACCTTAGAGAGCATTTCTGTAGATCTTGGTTTTAGTGGGAATACAATGGCTGAAGGTCTTGTTGTAAGTATATGTTTAGGAGGCGCTTTTATTGGATCTCTGTTAAGTGGGTGGATTGCAGATGGAGTTGGGCGTAGGAGAAGTTTCCAGTTGTGTGTATTGCCTATGATCATCGGGGCAGGAATGAGTGCAACAGCAAAAACCTTGTGGGGTATGCTTCTCGGAAGGTTATTTGTTGGTACTGGAATAGGACTAGGTCCGCCTGTTGCAGCTCTATATGTGGCTGAGGTCTCACCTCCGGCTATACGGGGTGCTTATGGGGGCTTAACTCAGATTGCAACATGTCTTGGACTCCTGGGTGCTCTCTTTATTGGAATCCCTTCCAAGGAAATAGTGGGTTGGTGGCGGATCTGTTTCTGGGTATCTGTCATTCCGGCTATAATACTTGCCCTTTTCATGGAGATCTGTGCAGAGAGTCCCTACTGGCTTTTCAAGAGAGGAAGAACCACTGAAGCTGAAGCTGAATTCGAGAAGCTCTTGGGAGGAGTACATGTGAAATCTGCAATGACTGAACTGTCGAAGTCTGACAAAGGCGATGATTCTGGTGCAGTAAAACTATCAGAATTATTTGGAAGACATTTCAGAGTGATGTTCATTGGATCTACGCTTTTTGCTTTGCAGCAGCTATCTGGCATAAATGCTATTTTCTATTTCTCTTCAACTGTCTTTGAAAGCTTTGGTGTACCATCAGATACTGCAAATATATGTGTAGGAATTTGTAATTTATTGGGGTCAGTTATTTCAATGATTCTGTTGGATAAACTTGGAAGGAAGGTGCTTCTCGTCGGAAGCTTTTTCAGCATGGCAGTAGCAATGGGTCTACAAGTCATTGCTGCAAGTTCTTTTGCCTCAGGAATTGGAGCCACGTATCTATCCGTTGGTGGCATGTTGCTGTTTGTGCTATCATTTGCTTTTGGTGCTGGTCCAGTTCCTTCTCTCCTCATGTCTGAAATACTACCTGGCAGGATCAGAGCCAAAGCAATGGCAATTTGCTTGGCGGTGCATTGGGTGATAAACTTCTTTGTGGGTCTACTATTTTTGCGCGCGTTGGAGAAAGTTGGGGCACAAGTCGTGTATACTAGTTTTGGTTCATTTTGTTTGATTGCTGTGTTTTTTGTGAAGAAATATGTTCTGGAAACAAAAGGGAAGTCACTCCAGGAAATTGAGGTTGCACTTCTTGCACAAGAAGCAACCTAA 1494 0.4371 MILQKPVESYSLAGLYRFAMRGRQRVASREYMYGNDKEQNPASMRLLNAKPSWRRSLRHVIVASISSFLYGYHIGVVNETLESISVDLGFSGNTMAEGLVVSICLGGAFIGSLLSGWIADGVGRRRSFQLCVLPMIIGAGMSATAKTLWGMLLGRLFVGTGIGLGPPVAALYVAEVSPPAIRGAYGGLTQIATCLGLLGALFIGIPSKEIVGWWRICFWVSVIPAIILALFMEICAESPYWLFKRGRTTEAEAEFEKLLGGVHVKSAMTELSKSDKGDDSGAVKLSELFGRHFRVMFIGSTLFALQQLSGINAIFYFSSTVFESFGVPSDTANICVGICNLLGSVISMILLDKLGRKVLLVGSFFSMAVAMGLQVIAASSFASGIGATYLSVGGMLLFVLSFAFGAGPVPSLLMSEILPGRIRAKAMAICLAVHWVINFFVGLLFLRALEKVGAQVVYTSFGSFCLIAVFFVKKYVLETKGKSLQEIEVALLAQEAT* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2046 497 ProSiteProfiles Major facilitator superfamily (MFS) profile. 59 480 IPR020846 GO:0022857
Lja3g2046 497 PRINTS Sugar transporter signature 152 171 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g2046 497 PRINTS Sugar transporter signature 415 427 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g2046 497 PRINTS Sugar transporter signature 67 77 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g2046 497 PRINTS Sugar transporter signature 392 413 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g2046 497 PRINTS Sugar transporter signature 306 316 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g2046 497 Pfam Sugar (and other) transporter 60 489 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja3g2046 497 CDD MFS_GLUT_like 62 478 - -
Lja3g2046 497 TIGRFAM SP: MFS transporter, sugar porter (SP) family 38 487 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g2046 497 ProSitePatterns Sugar transport proteins signature 1. 347 363 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lja3g2046 497 SUPERFAMILY MFS general substrate transporter 45 488 IPR036259 -
Lja3g2046 497 PANTHER PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED 23 494 - -
Lja3g2046 497 Gene3D MFS general substrate transporter like domains 54 492 IPR036259 -
Lja3g2046 497 PANTHER - 23 494 IPR045263 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2046 Lja-Chr3 23808357 23815993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2046 14 436 Organic Solute Cotransporters AT1G67300 64.815 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2046 - - lja:Lj0g3v0300919.2 838.95