Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2045 ATGGGGAGTGAGGACGATGCGGTGAAAGAGGGTCTCATAGTAGATGCTCGGGCAAGAAATATCAGTCACAATGTGAGGTGCACCGAGTGTGGGAGTCAGTCCATTGAAGATTCTCAAGCAGACATTGCCATTCTGCTCAGGAAGTTAATCCGAGATGAAATTCGGTCTGGAAAGAGTGACAAGGATATCTACAAAAAGCTCGAGGAAGATTTCGGTGAGACTGTACTCTATACACCTAAGTTTGATATGCAGACAGCAGCTTTGTGGTTATCACCGCTCCTAATTGCAGGTGCAGCTGCTGGAGTATGGGCTTACAAGAAGCATAAACAGAAGACTAATGTTCATATCATGGCTCTGAACCTTGTTAGAGGTGTTCCATTGACCCCAAGAGAGAAGGAAACAATGCTTGATATTCTCACACCACCTCCATCTCAAGGAGTTAGGACTTCCTACTGGTTGAGGAAATTGCAAGGTCAATGA 480 0.4521 MGSEDDAVKEGLIVDARARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKDIYKKLEEDFGETVLYTPKFDMQTAALWLSPLLIAGAAAGVWAYKKHKQKTNVHIMALNLVRGVPLTPREKETMLDILTPPPSQGVRTSYWLRKLQGQ* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2045 159 Pfam Cytochrome C biogenesis protein 15 133 IPR005616 -
Lja3g2045 159 CDD CcmH_N 14 79 - -
Lja3g2045 159 Gene3D Cytochrome C biogenesis protein 10 82 IPR038297 -
Lja3g2045 159 PANTHER - 1 154 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2045 K02200 - gmx:100306221 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2045 3 23804270 23806082 Lja3g2045 3 23804270 23806082 ECH