Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja3g2041 | ATGGAAAATTCAGATCATGTACTAGAGGTAGCATTGAAATGGATAGAAGGCCTTGCAAATGGAGATATTGGTCAGGAGATAGAAACTTCAACCACAAGGGGTATCCGTGTAGTTCAGGCACACAAAGGCTTCCTCCTCTGCGACTTCACTATACACACCGGTTTGTCGGATGAAAATGGAAATTGGCATGTGGGTGCAATAGCAACATTAGTTGATACCATTGGCAGCTTTGCCTCCTTCTCTGTTACCTCCTCATCTCAGCAAGTCACTCTTGATTTCAGCATATCTTACTATACAACGGTAAAGGTTCAGGAAGAAGTTAAAGTGCAGGCAAAAGTTATAGCAAAGAAGGATGAATTGACTTCTGTGATTGTGGAAGTCAGGAAAAAGGAGAATGGGGAATTGGTTGCCCTAGGAAAGCTGAGGTTTGCAGTACCTAGAAAGCATCCAAGACACCAAGAAAGTTGA | 468 | 0.4274 | MENSDHVLEVALKWIEGLANGDIGQEIETSTTRGIRVVQAHKGFLLCDFTIHTGLSDENGNWHVGAIATLVDTIGSFASFSVTSSSQQVTLDFSISYYTTVKVQEEVKVQAKVIAKKDELTSVIVEVRKKENGELVALGKLRFAVPRKHPRHQES* | 156 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja3g2041 | 155 | SUPERFAMILY | Thioesterase/thiol ester dehydrase-isomerase | 31 | 143 | IPR029069 | - | |
| Lja3g2041 | 155 | Pfam | Thioesterase superfamily | 59 | 134 | IPR006683 | - | |
| Lja3g2041 | 155 | CDD | PaaI_thioesterase | 34 | 145 | - | - | |
| Lja3g2041 | 155 | PANTHER | THIOESTERASE SUPERFAMILY MEMBER-RELATED | 6 | 145 | IPR039298 | GO:0047617 | |
| Lja3g2041 | 155 | Gene3D | Hotdog Thioesterase | 8 | 153 | - | - | |
| Lja3g2041 | 155 | PANTHER | SUPERFAMILY PROTEIN, PUTATIVE-RELATED | 6 | 145 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja3g2041 | Lja-Chr3 | 23762627 | 23766477 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja3g2041 | K17362 | - | gmx:100809050 | 187.193 |
Event-related genes