Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2030 ATGGAGACGAGTCGAAGAGCGGTGGAATCGTATTGGAGGTCGCGGTTGATTGATTCAGCTACTGCGGATGAAGATAAAGTCACGCCGGTGTACAAGTTGGAAGAAATTTGTGAGCTTTTGCGCTCTTCGCATGCTAGTATTGTGAAGGAGGTGTCAGAGTTTGTCTTGAAACGTTTGGAGCATAAGAGCCCAATTGTTAAACAGAAGGCATTAAGATTGATAAAATATGTGGTTGGAAAGTCTGGTGTGGAATTCAGAAGGGAAATGCAGAGACATTCGGTGGCAGTTCGTCAATTATTTCACTACAAAGGACAATTGGATCCTTTAAAAGGGGATGCACTAAATAAGGCTGTGCGAGACACTGCTCAGGAGGCTATATCTGCCATCTTTTCAGAAGAGAATAAGGCTGTGCCAGCACCTTCTGAAGATGTAAACAGGAGGATACAAGGATTTGGCAATACAAACTATGAAATGCCATCGGAAGATAAGAAATCTTTTATCAGTGAGGTAGTTGGGATGGGAAGTGCGTCAATTAAGCAAGGACTTAGTAACTTAACTCAGGGACATTCACTAATGAAGAATGAAACTGGAAGCTACCGGAGTCCAAATCTTCAAAGGTCTTTAACAAATGAAAGAGAACATGGCGACAGATATGAACCAGTTGCATATCGTAATGAAACTCAGAGTAGTTTTGGACTTTCAAGGAATCAATCTAGTGGTCCTTGGAATCAAGATTCAAGAGTAAATAAGGTGGAAATTTCAAATGGGGAATCCAGTGCAAATCATTCAGAGAGTAAGACAAGAGAGGAAAGGTTGGTGGAGTCAATTGTAACTTCTGGAGGTGTTCGTCTACAACCCACTCGAGATGCCATTCAAGTTTTTCTAACAGAGGCTGCAAAGTTGGATGCCCTGGCTTTAAGTCATGCCCTTGAACTAAAGCTCCAATCTCCAATTTGGCAGGTTCGCATGAAAGCTGTTTGTGTCCTTGATTCCATCCTTAGAAAGAAAGATGATGATCATTTTTCACTTGTGGAATCTTACTTTACTGAAAATAAAGACGTGGTGCTGAGATGTTCTGAATCCCCCCAAGCCTCTTTGAGGGAAAAGGCTGTGAAGGTTCTCGGTCTTCTAGGTGGAATTCAGCCAAATAGCTTTGCTATTAATTCAGAGAAGGCTGTAAAGACAGAGAGTGCTATTGTTGCTGAGTTGCCTGACTTGATAGACACTGGCGATTCAAGTGATTATCTCCGAACTGATGACCCAACAAAGAGTACAAACAACCCAAATATAACAAATTCGACATCATCCACACCCCTAGTTGATGATTTATTTGGAGATTTTAGTGGCTCCAATGGAGCTAGTCATGAACTGAAAAATGATGATGACCCGTTTGCTGATGTATCATTTCATGCAAGTGAGAAAAAAGGACATGCAGATGATCTCTTTTCGGGGATGACAGTTGGTGGTGATAAACAGGGTGATAATGCGAATCACGTGTTGGGGAATAAAAGCGATCCTGAACTTTTTGACATTTTTGCTTCCAATTCCGAGCAAGGAAACAAAGAGTTCGTTGGAGACTTAATGGCTGGTTTGTCAATTGATGAAAATACCTCAAGTACGAAGCAGAAGGGAACATCTCCCACCTTGGAATCTGAATCTTTATTTACAGGTTTAAATAATCATATCCCTGACAATACTTCAGGTGGCATGTTGGGCTCTCAGCCACTTGGATTTAATGTAAATCCCATGTTTCCTGCCGGTAGTCTTCCTTATAATATACAACCTGGTGTTATGTTGAACCATCCGTATACCTCTCAGCCTCTTAATTATGGTGCTATGGGAACTCTCTTGGCTCAGCAACAATTCCTGGCAACAATGGCTAATTTCCAACACCTTAGTAATGTGAACATGCGAGATGATGGTGTTGCTCAAATTGCTGGACCCAATGGAAGAACACCGATACCAGACATATTTCAACCAGGTTTTTCACCTCAAACTCCCAGCTCAATGATCAACAGTTCAAAGAAAGAAGACACTAAAGCATTTGATTTTATCTCGGACCATCTTGCCTCTTCTCGTGATTCAAGGAGAGTGATTTGA 2100 0.4152 METSRRAVESYWRSRLIDSATADEDKVTPVYKLEEICELLRSSHASIVKEVSEFVLKRLEHKSPIVKQKALRLIKYVVGKSGVEFRREMQRHSVAVRQLFHYKGQLDPLKGDALNKAVRDTAQEAISAIFSEENKAVPAPSEDVNRRIQGFGNTNYEMPSEDKKSFISEVVGMGSASIKQGLSNLTQGHSLMKNETGSYRSPNLQRSLTNEREHGDRYEPVAYRNETQSSFGLSRNQSSGPWNQDSRVNKVEISNGESSANHSESKTREERLVESIVTSGGVRLQPTRDAIQVFLTEAAKLDALALSHALELKLQSPIWQVRMKAVCVLDSILRKKDDDHFSLVESYFTENKDVVLRCSESPQASLREKAVKVLGLLGGIQPNSFAINSEKAVKTESAIVAELPDLIDTGDSSDYLRTDDPTKSTNNPNITNSTSSTPLVDDLFGDFSGSNGASHELKNDDDPFADVSFHASEKKGHADDLFSGMTVGGDKQGDNANHVLGNKSDPELFDIFASNSEQGNKEFVGDLMAGLSIDENTSSTKQKGTSPTLESESLFTGLNNHIPDNTSGGMLGSQPLGFNVNPMFPAGSLPYNIQPGVMLNHPYTSQPLNYGAMGTLLAQQQFLATMANFQHLSNVNMRDDGVAQIAGPNGRTPIPDIFQPGFSPQTPSSMINSSKKEDTKAFDFISDHLASSRDSRRVI* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2030 699 ProSiteProfiles VHS domain profile. 35 89 IPR002014 GO:0035091|GO:0043130
Lja3g2030 699 MobiDBLite consensus disorder prediction 419 437 - -
Lja3g2030 699 MobiDBLite consensus disorder prediction 192 206 - -
Lja3g2030 699 PANTHER UNCHARACTERIZED 1 691 IPR039273 -
Lja3g2030 699 SUPERFAMILY ARM repeat 36 385 IPR016024 -
Lja3g2030 699 MobiDBLite consensus disorder prediction 228 247 - -
Lja3g2030 699 MobiDBLite consensus disorder prediction 410 437 - -
Lja3g2030 699 CDD ENTH_like_Tepsin 13 132 IPR035802 -
Lja3g2030 699 Pfam ENTH domain 17 129 IPR013809 -
Lja3g2030 699 Gene3D - 2 140 IPR008942 -
Lja3g2030 699 MobiDBLite consensus disorder prediction 192 219 - -
Lja3g2030 699 SMART VHS_2 13 148 IPR002014 GO:0035091|GO:0043130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2030 - - gmx:100790466 1160.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2030 3 23671844 23676667 Lja3g2030 3 23671844 23676667 ECH