Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2029 ATGGCTTCCCATTTGAATCTGCAACACCAACTCCTCAACAATTTCAGATCCTTGGGGTTAGATCTAAGAAAAAAGACAAAGGCCTATGCCTTTCCACAAGCCAATTCGAACACAATAGAGGAAAGAAACAGAAGCTCTTTGATTGGGGGTCTGTTAGTTGGATCTTTGTCTAGATATTACACATCTTTAAGGAAATGCTCATCATTGGGAGCATCAACTAATCTTCATTTTTCCTGTACTGATCAAAATGAAGAAGAAGAGATTACTAATGTTACATCAAGTAGTCAGGGAATGGAGTTTAATAGGGTGGATTGTGTTGTGTGGGTACTGCATGAATCTGCTAGGAGTTTCTCCCAAGCAGCTGAGTCAATCGGACTAGCAAGGAGCGGTCGAGGGCTTGCAATGGCTTGGATAGGGAAGGATGTGCGTGTGTGGCATAGACGTATTGCTTATCAGGTTGCAGTTTATGCTTTATTGAAAACAGCAATTGAATTGGAGATATTGCTTTCACAAGAACGACAGAATGAATCTTCCCCTGTTAGAAATATTTTGACACCATTAATTAATCAGATGGGAGAACGCATCGAAAGTCAACTGAAAATGAAGCATCCATATTTGGTGCAGTGGTTTAGAGACACCAAAATGCCACGAATGACAGGATATTTTATTCCACTTCTAAAACAGTGGTCCATGGAATATGCTGGAAGCGGTATTGCAGGAATTATTGTAGCAATAACGTGCTGTAGTGCAGTGGTCAAATTGGGCTCGAGTCGCATCTGCTGCTCCAAACTTGTATCGTCTCTTGAAGACGTTTTGGTCAAGCTTATGGATTTTTCACTTAATCTTGCAACTTTGGACAAGTTACACCAGCTTGCAACTGGGGCGGGATTTGAACTGAATTTCTTGTCCCATTTTGGTGGGAAGGTTCTTCCCAGTGAAAAAACTGAGGACCTAGAGTTTTGGATTGGTTTGGCTCATATGAAACTTTTCAAAGCTTTCTCCAAAAAGAGCATCACTTTAAGCAAACAAAATTTTCTGCACAAGATTCATTCAGAAAGTTTGGCTACATTGGGACTCTTTGCATATCTTGGAAGAAGGACTAGAATTTTTTTGTCTGCTATGGGCATTAAGGATCTTGATGAAATGGTTAAGGACTTCCTCAGTTACTTGGAATGTGGCATACTTTTCATCTATCCAGAATTTTCCTCCATCCCAGTGTATCAGCTTTTCATGGAGGTAGTAATTGATGAGATTGGGTGGCTTGATTTTTATGCTTCATATGCTCAAATAAACTGTAAGGAGAAAGGGCCAAAATATCATGCTTGCCACGCAGAGAAGGAGATTATTTCTTCTGTAGTTTTTACTGTGTGCTATGATGTTTTCTCTGGGTTTGCGCACTTTGATCGCTCAACTCAACAATCATTGGACATAGCTTCACTTTCATACTTGCTTCGCTGTCAGGGATTGCTAAGTATTTGTCTGCAAGATCACTGGGCTGCTTACGAAAAATCAGGTCAATCACTAAATATTGTGGATCATCCTGCATTTGACAACCAAACATCATATATGGGAAGTATAAATGGACCCAAGTTACCTTTGGTGTTTGAAGTGCAGCAGAAGTCACATGATTTAACTGTAGAGGGATGTCCAAAGAGTAATTCTCAAAACAATTATACATTAAAAAAGGTTCCAATATCAGCAACTACAAACAAGAGAACACATGGGAAAGGTTCCTGCACTGATAAGTCAAATCCAACGCGTGAAAATTTTATCAAGAGATACAGCATCAAATTTGCATCCACAACTGCAAACTTCTGGATGGGTACTATGTTGCTCTTCACAGACATCATGGTTGCTGTAGAGCTACTTGTGAAGCAAGCACATGGATTCAAGGCTTCAAGGAGTCAAAGAAAGAGGCTAGGAAGGACCATGACTGACATAATTGTGCTGATTCCAGTGACAATTTTGATGCTACTTCCACTAACAGCCGTGGTCCATGCAGCCATACTAGCAGCTATCAAGAAGTACATGCCATTCTTGATCCCTTCCTCTTATTCCTCAGAGCGCTTGGATGTTGTAAGGCAAATAAAGTTAACAAGAGAGATGGATGATCAGTCATGGGGAGACCTCGGAGATCAATTAAGAACCGTCTCTTGA 2157 0.4047 MASHLNLQHQLLNNFRSLGLDLRKKTKAYAFPQANSNTIEERNRSSLIGGLLVGSLSRYYTSLRKCSSLGASTNLHFSCTDQNEEEEITNVTSSSQGMEFNRVDCVVWVLHESARSFSQAAESIGLARSGRGLAMAWIGKDVRVWHRRIAYQVAVYALLKTAIELEILLSQERQNESSPVRNILTPLINQMGERIESQLKMKHPYLVQWFRDTKMPRMTGYFIPLLKQWSMEYAGSGIAGIIVAITCCSAVVKLGSSRICCSKLVSSLEDVLVKLMDFSLNLATLDKLHQLATGAGFELNFLSHFGGKVLPSEKTEDLEFWIGLAHMKLFKAFSKKSITLSKQNFLHKIHSESLATLGLFAYLGRRTRIFLSAMGIKDLDEMVKDFLSYLECGILFIYPEFSSIPVYQLFMEVVIDEIGWLDFYASYAQINCKEKGPKYHACHAEKEIISSVVFTVCYDVFSGFAHFDRSTQQSLDIASLSYLLRCQGLLSICLQDHWAAYEKSGQSLNIVDHPAFDNQTSYMGSINGPKLPLVFEVQQKSHDLTVEGCPKSNSQNNYTLKKVPISATTNKRTHGKGSCTDKSNPTRENFIKRYSIKFASTTANFWMGTMLLFTDIMVAVELLVKQAHGFKASRSQRKRLGRTMTDIIVLIPVTILMLLPLTAVVHAAILAAIKKYMPFLIPSSYSSERLDVVRQIKLTREMDDQSWGDLGDQLRTVS* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2029 718 PANTHER LETM1 AND EF-HAND DOMAIN-CONTAINING PROTEIN ANON-60DA ISOFORM 1 13 714 - -
Lja3g2029 718 PANTHER LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN 13 714 IPR044202 GO:0005743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2029 Lja-Chr3 23665689 23670690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2029 597 685 EF-hand Containing Proteins AT3G59820 34.831 6.31e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2029 - - ccaj:109807252 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2029 3 23665689 23670690 Lja3g2029 3 23665689 23670690 ECH