Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2024 ATGGTGAGCGAGCAGAAAACACCAGAGGAGGCCCTACAGGACTCAAAGGTGGTAGCTATAGAGAACAGTGGTACAATAAGCGGCTCCCTCGTCGGAGCCGCCGCTGAGATTCGCCGGCGCCGGAGGGCAGAGGCGATACAGTTGTCCCTGAGGGCGCTCTGCATGGCCACCTCTGTGGTTTCTCTCTCGTTAATGGTGACAGCTAAGCAAGCTAGCTCAGTTTCCATCTATGGCTTTCGCTTACCTGTTCACTCCAAATGGTCCTTCTCTGAGTCTTACGAATATCTTGTTGGGGTTTCTGCTGCAGTTGCGGCTCACTCCTTCCTGCAACTACTCATTGGCTCATCAAGATTTCTCAGGATGTCTTCTTTGATTCCTTCCAGAAATCATGCATGGCTTATTTTTGCTGGGGATCAGGTATTTGCTTATGCATTGATGAGTGCTGGATCGGCTTCATCTGGAGTGACCAACCTGAATCGCACAGGAATTAGACACACAGCACTGCCAAATTTTTGCAAACCTTTGCACAAGTTCTGTGACCATGTTGCCATATCAATAGTCTTCACTTTCATCAGTTGTTTTTTGCTTGCCACGTCAGCTGTCCAAGACATAATATGGCTCTCCCAACACTGA 633 0.4882 MVSEQKTPEEALQDSKVVAIENSGTISGSLVGAAAEIRRRRRAEAIQLSLRALCMATSVVSLSLMVTAKQASSVSIYGFRLPVHSKWSFSESYEYLVGVSAAVAAHSFLQLLIGSSRFLRMSSLIPSRNHAWLIFAGDQVFAYALMSAGSASSGVTNLNRTGIRHTALPNFCKPLHKFCDHVAISIVFTFISCFLLATSAVQDIIWLSQH* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2024 210 Pfam Casparian strip membrane protein domain 41 195 IPR006702 -
Lja3g2024 210 PANTHER CASP-LIKE PROTEIN 3A2 5 209 - -
Lja3g2024 210 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 5 209 - -
Lja3g2024 210 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 48 203 IPR006459 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2024 41 210 Miscellaneous Gene Families AT3G16300 50.000 6.36e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2024 - - pvu:PHAVU_010G146500g 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2024 3 23585507 23588618 Lja3g2024 3 23585507 23588618 ECH