Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2012 ATGGATCGCTCCTCAAACCGAGAACACCGAGATAACCAAGATCGTCGCGCTTCAGGTAAACGAGGCCCAGATATTTTAGAGTGGAAGTGGCAATTTGAAGCAAAATCTAAGAAAGACTTAGCATGGCATGATGTTGGAACGTGGGTTAACTTCAAATATTCGGGGACTCGCGAACTTGAAGTTCTTGTACGATATGCTGGATATGACAAGGTGGATGAAGAGTGGGTGAATGTGAAAAACGAGATGCGAGAGAGATCTATCCCATTGGAACCTTCACAGTGTCACAAGGTGAAGGATGGAGATCTTGCAGTATGTTTACAGGAAAGGGATCATTATGCACTCTACTTTGATGCTCGTGTAGTGAGAATTCAAAGGAGGCAACATGATGCGACAGATTGCAAGTGTATCTTCACTGTTAGATTTCTCCATGACAACTCTGAGGAAGAAATTGATTGGAAGAAGGTATACTATAGGCCTACACAAGAGGAATCTGTTGTCGACCATAACACCCCAGAACCTACCAAAGAACCCAAGAGGCCTAAACAAGAGGAATCTGTTGGCTGCCATAGCTCCCCAGAACCTACCAAAGAGCCCAGCCTAAGTGACATTGAGAACTTATGGCCATGA 627 0.445 MDRSSNREHRDNQDRRASGKRGPDILEWKWQFEAKSKKDLAWHDVGTWVNFKYSGTRELEVLVRYAGYDKVDEEWVNVKNEMRERSIPLEPSQCHKVKDGDLAVCLQERDHYALYFDARVVRIQRRQHDATDCKCIFTVRFLHDNSEEEIDWKKVYYRPTQEESVVDHNTPEPTKEPKRPKQEESVGCHSSPEPTKEPSLSDIENLWP* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2012 208 Pfam SAWADEE domain 30 155 IPR032001 GO:0003682
Lja3g2012 208 MobiDBLite consensus disorder prediction 1 20 - -
Lja3g2012 208 Gene3D - 89 161 - -
Lja3g2012 208 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 14 162 IPR039276 -
Lja3g2012 208 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 14 162 - -
Lja3g2012 208 Gene3D - 29 88 - -
Lja3g2012 208 MobiDBLite consensus disorder prediction 168 186 - -
Lja3g2012 208 MobiDBLite consensus disorder prediction 161 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2012 Lja-Chr3 23358786 23362879 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2012 - - gmx:100799110 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2012 3 23358786 23362879 Lja3g2012 3 23358786 23362879 ECH