Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2010 ATGCCGGAAATCCCCGTCGATTTCCGCGCTCCGCCGCCGTCTCCGGTGGCCTCCGGCCGCAGATCTTCCTTCACGAACGAAGACATTCTGACGGAGTTTCTAGAAACCTCGCCTCGCGTCCCCGATCTGGTTCTCCCGGACAACATCTTCCCCAAACAGAGGCACCTCGAATCCCCTCCCGTCGTCGATTTCGTCTCCCTCTGCTTCCACCACGACGACGCACTCCGCGATGTTGTTTCACGCTCCATGGCCACGATCGGGTGCTTCCAGATCATCAACCACGGCATTCCGCCGCAGCTCATCACCTCCGTTGCCCAATCCGCCGCCGGGATATTTTGCGTGCCGCTGGGCAATCGAGCGGCGGTGACGAGGTCGCCGGAGAAGCCGTGGGGGTTCGAGGAGTATCATTCAGAGGAAGAAGAAGAGGAGGCAAATGAGTTCAGTGAAGAATTCGTGTGGTGTGAAGATCATGAGTTCAAGTTGAAAATGGAGGGAATTTTGCCACGTGGATATCAGAATTTCAGCGAGAAGATGGAAAGTCTAAAGACACGGGTGGAGACGGTGGCTGAGAAAATTTTAGCAGTGATGTTGAAAAACGTTGCTAGGAAATTTGAAGGTGATGTTAATGTGGTTCGTTGTGGGCATGAAGTTGGGAGTGTTTGTTGCATTTCCAAGCATTGCAGAGATGATAGGAGTGGGAGATGGGGTAGCTCATTGAAATATGATGTGATTAGAATGCTGATTAGGGGAGCAGATTACTATCATTCACTGTGTGTGCATGTCTGTGATGGGTGTTCAGAGTTTCACGTTTACTCCAAGAAAAGTTGGCTCTCTTTTTACCCTGAGCAAGGTGCTCTTATAATCACTGGTGGAGATCAAACCCAGATATTAAGTGGGGGATACTACAAGCATGTGATTGGAAGACCAATATTTCAATGTGAGAAGGAAGACAACATTTCAATGACTTTCCTCTATTCTCCTCCGAACAGTGAGAACAATTTTGAAACCTATGAGGAAAGAACTATTACTCTTGGCCAGCAAGTCATCATGGCTATAGTTCTGACCCTTATGTACCATGTCTTGATTTATGGCTACCAAAACATTTGA 1107 0.4869 MPEIPVDFRAPPPSPVASGRRSSFTNEDILTEFLETSPRVPDLVLPDNIFPKQRHLESPPVVDFVSLCFHHDDALRDVVSRSMATIGCFQIINHGIPPQLITSVAQSAAGIFCVPLGNRAAVTRSPEKPWGFEEYHSEEEEEEANEFSEEFVWCEDHEFKLKMEGILPRGYQNFSEKMESLKTRVETVAEKILAVMLKNVARKFEGDVNVVRCGHEVGSVCCISKHCRDDRSGRWGSSLKYDVIRMLIRGADYYHSLCVHVCDGCSEFHVYSKKSWLSFYPEQGALIITGGDQTQILSGGYYKHVIGRPIFQCEKEDNISMTFLYSPPNSENNFETYEERTITLGQQVIMAIVLTLMYHVLIYGYQNI* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2010 368 Coils Coil 365 368 - -
Lja3g2010 368 PANTHER - 5 367 - -
Lja3g2010 368 Gene3D - 29 352 IPR027443 -
Lja3g2010 368 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 367 - -
Lja3g2010 368 SUPERFAMILY Clavaminate synthase-like 45 331 - -
Lja3g2010 368 Pfam non-haem dioxygenase in morphine synthesis N-terminal 60 153 IPR026992 -
Lja3g2010 368 MobiDBLite consensus disorder prediction 1 22 - -
Lja3g2010 368 Coils Coil 171 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2010 Lja-Chr3 23317273 23319382 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2010 - - aprc:113851004 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2010 3 23317273 23319382 Lja3g2010 3 23317273 23319382 ECH