Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2006 ATGGCATCTTACAGGCCTTTCCCTCCGCCGTCGAGTCAAAACCCTATCTCAGCCCCACCACCACCGCAGCCACCGCAACAACGCGGCAATCATCAGGGCAATTGGGGTGGTGGCGGTGGTTGTTACGGTTACGCTCCTGGTGCTGCAGATCCTTCTACTTCTTCATTCCCCCAAATGCCTCCGAATTCCAATTATCACCACCATCAACAACAGCAGCACCATCATGCTCCTCCGCCTAATTCCTATCACCACCACTATGCATACCCACCGGCGCCACTTCCGCCGCCTCCTCCGCCACCACCTGAAACATCCTACCACCCACCACCGCCTCCTCCTCCTATGTATTACCCCCCTTCTAGTAATAGTCAATACAATCACCAACAACCACCACCTCCTCCGCCGTTGTCGCCGGGTGCTTCTTCTGTCCCACCACCACCACCTCCTCCTGCCTCGCCGCCGCCTCCTCCTCCGAATAATGAAGAGAGGGCGTTTACTAAAGGCTCCTTGAAGGATCCTTCCACATCCGGCAGGCGCGAATACGAGCATTCGAATCATAAGCAGCACAGCAAGCCTCCTCCGGGTCCGGTGCATAAGGTGAGTGGGGCTGTCAGGAGGGCTGAGACCGATGAGGAGAAGAGGTTGAGGAAGAAGAGGGAGTATGAGAAGCAGAGGCAGGAAGAGAAGCATAGGCAGCAGCAGCAGTTGTTGAAGGAATCCCAGAACAATGTGTTGCAAAAGACTCAGATTTTGGCTTCGGGGAAGGGAGGGCATGGCTCTTCTATTGCGGGGTCTCGAATGGGAGAAAGGAGAACTGCTCCTTTATTGAGTGGTGAGAGGGTTGAAAATAGGTTGAAAAAGCCTACCACTTTTTTGTGTAAGCTCAGATTCCGAAATGAACTTCCAGATCCAAGTGCGCAACCTAAGCTTATGGCGTTCAAGAAAGATAAAGATCAATATGCAAAATATACAATCACATCTCTGGAGAAAATGTACAAACCTAAACTTTTTGTGGAGCCAGATCTGGGGATACCTCTGGACCTGCTTGATCTCAGTGTTTACAATCCTCCCAGTGTCAGACCACCTCTTGCTCCAGAAGATGAAGATTTATTAAGAGATGATGAAGTGATCACTCCAGTAAAAAAAGATGGCTTAAAGAGAAAAGACAGGCCTACTGATAAAGGTGTAGCTTGGCTTGTTAAAACACAATATATATCTCCACTAAGCATGGATTCGGCGAAACAGTCTTTAACTGAAAAACAAGCTAAGGAGCTGAGAGAGATGAAGGGGCGCGGCATTTTGGATAATCTTAACAGTAGGGAAAGACAAATCAGGGAAATTGAAGCATCATTTGAAGCAGCAAAGTCGCACCCTGTTCATGCAACCAACAAAGATTTGTATCCTGTTGAGGTTTTGCCATTGCTGCCTGATATTGATAGGTATGAGGATCAGTTTGTTCTTGCTGCATTTGATAATGCTCCCACAGCTGATGCTGATATGTACACTAAATTAGACAAATCTGTTCGTGATGCCTATGAATCAAGGGCAGTTATGAAAAGTTATGTTGCAACCGGCTCCGATCCTGCAAATCCTGAGAAATTTTTGGCATACATGGCCCCAACACCTGGAGAGCTGTCAAAGGATATATATGATGAAAATGAAGATGTTTCTTATTCTTGGGTCCGCGAATATCATTGGGATGTTCGGGGTGATGATGCAGATGACCCTACAACATTCTTAGTTGCATTTGATGAGTTAGAAGCACGCTATGTGCCTCTTCCAACTAAACTTGTTTTAAGAAAAAAGAGGGCTACAGAGGGAAGATCTGGTGATGAGGTTGAGCAATTTCCAATACCTTCAAAAGTGACTGTAAGGCGGAGATCAAGCGTTGCTGCAATTGAGCGGAAGGATTCTGGGGTTTATACAAGTTCAAAGGGTAATTCATCGAGGAGAGGAGATTTGGAAATGGATGATGATGCTCTCGAACACCAACATAGAGTTGCAGCACACCAGGACAATTATCAGTCGAGTGGAGCAGAAGATGACATGTCTGATTGA 2055 0.471 MASYRPFPPPSSQNPISAPPPPQPPQQRGNHQGNWGGGGGCYGYAPGAADPSTSSFPQMPPNSNYHHHQQQQHHHAPPPNSYHHHYAYPPAPLPPPPPPPPETSYHPPPPPPPMYYPPSSNSQYNHQQPPPPPPLSPGASSVPPPPPPPASPPPPPPNNEERAFTKGSLKDPSTSGRREYEHSNHKQHSKPPPGPVHKVSGAVRRAETDEEKRLRKKREYEKQRQEEKHRQQQQLLKESQNNVLQKTQILASGKGGHGSSIAGSRMGERRTAPLLSGERVENRLKKPTTFLCKLRFRNELPDPSAQPKLMAFKKDKDQYAKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRPPLAPEDEDLLRDDEVITPVKKDGLKRKDRPTDKGVAWLVKTQYISPLSMDSAKQSLTEKQAKELREMKGRGILDNLNSRERQIREIEASFEAAKSHPVHATNKDLYPVEVLPLLPDIDRYEDQFVLAAFDNAPTADADMYTKLDKSVRDAYESRAVMKSYVATGSDPANPEKFLAYMAPTPGELSKDIYDENEDVSYSWVREYHWDVRGDDADDPTTFLVAFDELEARYVPLPTKLVLRKKRATEGRSGDEVEQFPIPSKVTVRRRSSVAAIERKDSGVYTSSKGNSSRRGDLEMDDDALEHQHRVAAHQDNYQSSGAEDDMSD* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2006 684 MobiDBLite consensus disorder prediction 83 160 - -
Lja3g2006 684 Pfam Paf1 290 649 IPR007133 GO:0006368|GO:0016570|GO:0016593
Lja3g2006 684 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 266 683 IPR007133 GO:0006368|GO:0016570|GO:0016593
Lja3g2006 684 MobiDBLite consensus disorder prediction 669 684 - -
Lja3g2006 684 MobiDBLite consensus disorder prediction 649 668 - -
Lja3g2006 684 MobiDBLite consensus disorder prediction 51 67 - -
Lja3g2006 684 PANTHER RNA POLYMERASE II ASSOCIATED FACTOR PAF1-RELATED 266 683 - -
Lja3g2006 684 MobiDBLite consensus disorder prediction 8 27 - -
Lja3g2006 684 MobiDBLite consensus disorder prediction 164 188 - -
Lja3g2006 684 MobiDBLite consensus disorder prediction 235 254 - -
Lja3g2006 684 MobiDBLite consensus disorder prediction 1 280 - -
Lja3g2006 684 SUPERFAMILY Formin homology 2 domain (FH2 domain) 133 353 - -
Lja3g2006 684 Coils Coil 203 242 - -
Lja3g2006 684 MobiDBLite consensus disorder prediction 626 684 - -
Lja3g2006 684 MobiDBLite consensus disorder prediction 202 234 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2006 K15174 - gmx:100800148 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2006 3 23220088 23225152 Lja3g2006 3 23220088 23225152 ECH