Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2001 ATGAAAACGGGGAAGGTGGCGATGGTGATCGGAGCTGCGACGGCGTGCGCGGTGGCGGCGGTGGTGGTGCAGCGGTACGTGAAGAAATCACGGCGATGGGGGAGAGTAATGGCGATATTGAAGGAGTTGGAGGAGAAGTGCGCCACGCCGATGTGGAAGCTCAGGCAGGTTGCCGATGCCATGACGGTGGAGATGCATGCCGGTCTTGCTTCTGAAGGTGGTAGCAAGCTCAAGATGCTTATCACTTACGTTGATAATCTACCAACCGGCAATGAGGAAGGGCTATTTTATGCATTGGACCTTGGAGGGACAAACTTTCGAGTGTTACGCGTGCAACTGGGAGGCAAGGATGGTGGTATTGTCAGTCAAGATTTTACTGAGGTTTCAATTCCTCCTAATTTGATGGTTGGGACATCAGATGAACTCTTCGATTATATTGCTGCAGAACTTGCGAAATTTGTTGCCCAAGAAGATCAAAAGTTTCAAGTTCCTCCTGGTGGACGGAGAGAACTAGGTTTTACCTTTTCATTTCCTGTCATGCAAACGTCAATTACTTCTGGGAACCTTATCAAGTGGACAAAAGGCTTCAACATAGATGATGCAGTTGGCAAGGATGTTGTGGCAGCACTGACAGAAGCCATTCAGAGACAAGGCCTTGATATGCGTGTAACAGCTTTGGTCAATGATACAGTTGGGACATTAGCTGGAGGTCGATACACAAACAAGGATGTTATCGCGGCTGTTATTTTAGGCACTGGAACAAATGCGGCATATGTGGAACGTGCTCAGGCAATACCAAAATGGCATGGTACTTTGCCCAAGACCGGAGAGATGGTTATCAATATGGAATGGGGAAACTTCAGGTCGTCACACCTTCCATTAACTGAGTATGATTCTTCATTAGATGCTGAGAGTTTAAACCCCGGTGAACAGATTTTTGAGAAGATAATTTCTGGGATGTACTTGGGAGAAATTGTTCGTAGAGTTCTGTGCAAAATGGCTGAAGAAGCTTTAATTTTTGGTGACACGGTTCCTTCAAAACTGAAAGTTCCATTCATATTAAGGACACCTGACATGTCTGCAATGCATCATGACTCATCTGCTGATCTCAGTGTGGTTGGAAGCAAACTGAAGAGCATTTTGGAGATACCTGGTACCCCTCTGGAAGTGAGGAAGGTGGTTGTTGAGCTTTGCAATATTATTGCTACCCGCGGTGCTCGTCTTTCTGCTGCTGGCATCTTCGGTATCCTGAAGAAGTTGGGAAAAGACACCATCAGTGATGTTGAGGGTCAGAAGAATGTGATAGCCATGGATGGTGGGTTGTATGAACATTACTCTGAGTATAGCCAGTGCCTGGAGAATACCCTTCATGAGTTGGTTGGTGAAGATGTCTCAAAAAGCGTTGTGATTGAGCACTCCAATGATGGTTCAGGAATCGGTGCTGCTCTTCTTGCTGCCTCTCATTCCCAGTACCTTGAAGGTTAA 1485 0.4646 MKTGKVAMVIGAATACAVAAVVVQRYVKKSRRWGRVMAILKELEEKCATPMWKLRQVADAMTVEMHAGLASEGGSKLKMLITYVDNLPTGNEEGLFYALDLGGTNFRVLRVQLGGKDGGIVSQDFTEVSIPPNLMVGTSDELFDYIAAELAKFVAQEDQKFQVPPGGRRELGFTFSFPVMQTSITSGNLIKWTKGFNIDDAVGKDVVAALTEAIQRQGLDMRVTALVNDTVGTLAGGRYTNKDVIAAVILGTGTNAAYVERAQAIPKWHGTLPKTGEMVINMEWGNFRSSHLPLTEYDSSLDAESLNPGEQIFEKIISGMYLGEIVRRVLCKMAEEALIFGDTVPSKLKVPFILRTPDMSAMHHDSSADLSVVGSKLKSILEIPGTPLEVRKVVVELCNIIATRGARLSAAGIFGILKKLGKDTISDVEGQKNVIAMDGGLYEHYSEYSQCLENTLHELVGEDVSKSVVIEHSNDGSGIGAALLAASHSQYLEG* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2001 494 CDD NBD_sugar-kinase_HSP70_actin 98 260 - -
Lja3g2001 494 ProSiteProfiles Hexokinase domain profile. 34 486 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Lja3g2001 494 SUPERFAMILY Actin-like ATPase domain 243 491 IPR043129 -
Lja3g2001 494 SUPERFAMILY Actin-like ATPase domain 25 241 IPR043129 -
Lja3g2001 494 Gene3D - 60 474 - -
Lja3g2001 494 PANTHER HEXOKINASE 3 492 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Lja3g2001 494 PANTHER HEXOKINASE-1 3 492 - -
Lja3g2001 494 PRINTS Hexokinase family signature 394 416 - -
Lja3g2001 494 PRINTS Hexokinase family signature 471 487 - -
Lja3g2001 494 PRINTS Hexokinase family signature 246 260 - -
Lja3g2001 494 PRINTS Hexokinase family signature 97 113 - -
Lja3g2001 494 PRINTS Hexokinase family signature 171 196 - -
Lja3g2001 494 PRINTS Hexokinase family signature 311 333 - -
Lja3g2001 494 PRINTS Hexokinase family signature 223 239 - -
Lja3g2001 494 Gene3D - 82 485 - -
Lja3g2001 494 Pfam Hexokinase 246 486 IPR022673 GO:0005524|GO:0005975|GO:0016773
Lja3g2001 494 ProSitePatterns Hexokinase domain signature. 171 196 IPR019807 GO:0004396|GO:0005524|GO:0006096
Lja3g2001 494 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Lja3g2001 494 Pfam Hexokinase 40 239 IPR022672 GO:0005524|GO:0005975|GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2001 Lja-Chr3 23162007 23168479 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2001 K00844 - gmx:100783775 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2001 3 23162007 23168479 Lja3g2001 3 23162007 23168479 ECH