Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1998 ATGAGGATGAAGATACTTCTTGTCCTCGTTGCTACAATTTTAGCAACATGTCATGGCTCCTCAGACCATGGGGCTTCCTTCAAAGTCTTCTCTCTCCGGATTAAAACTGGCTCCGGTGGCCATTACATTCCTGATGTATCTTGCGCTAGTTGGAGGCTTGGTGTGGAATCACACAACATCATTAATTGGAAAACCATTCCACAAGAATGTGAAGGATATGTATGGAACTACATGATAGGCCAACAATACAGATCAGACTCCAAAATTGTGTGTAAGGAAGCCTACTTTTATGCTAAGAGTCTCAATCTCACTCGAGATGGCAAGAACATTTGGGTGTTTGACATAGATGAGACTTCACTGTCTAACCTCCCATACTATGCTGAACACGGTTTTGGACGGCGTTTAATCTATGGGTTGACCGTTGACCGTGCTGCCGCACCTGCACTGCCGGAGTCTCTGAAACTGTACAACAAACTCTTGTCTATTGGCATCAAGGTTGCATTCTTAACAGGAAGACCATTGGCTCAAAAGGATATTACTGCTAAGAACTTAAAGCTTGCTGGGTTCTACACTTGGGAAAAGCTCATTCTCAAGGAACCATCAACATATTCTGGTAAAACAGCAGTTACATACAAATCAGCGGAGAGAAAGAAACTGGAGGAAGAAGGATACAGAATCATTGGAAACATTGGAGACCAGTGGAGTGATATCTTAGGAACCACCACAGGCAACAGGACTTTCAAGCTGCCTGATCCCATGTACTACATTAGTTGA 774 0.4341 MRMKILLVLVATILATCHGSSDHGASFKVFSLRIKTGSGGHYIPDVSCASWRLGVESHNIINWKTIPQECEGYVWNYMIGQQYRSDSKIVCKEAYFYAKSLNLTRDGKNIWVFDIDETSLSNLPYYAEHGFGRRLIYGLTVDRAAAPALPESLKLYNKLLSIGIKVAFLTGRPLAQKDITAKNLKLAGFYTWEKLILKEPSTYSGKTAVTYKSAERKKLEEEGYRIIGNIGDQWSDILGTTTGNRTFKLPDPMYYIS* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1998 257 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 41 256 IPR005519 -
Lja3g1998 257 TIGRFAM plant-AP: plant acid phosphatase 46 256 IPR010028 GO:0003993
Lja3g1998 257 PANTHER VEGETATIVE STORAGE PROTEIN 1-RELATED 5 256 - -
Lja3g1998 257 PIRSF VSP 1 257 IPR014403 -
Lja3g1998 257 Gene3D - 44 257 IPR023214 -
Lja3g1998 257 SUPERFAMILY HAD-like 103 254 IPR036412 -
Lja3g1998 257 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 5 256 - -
Lja3g1998 257 CDD HAD_VSP 74 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1998 Lja-Chr3 23088768 23108803 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1998 - - gmx:547669 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1998 3 23088768 23108803 Lja3g1998 3 23088768 23108803 ECH