Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1997 ATGAGGATGAAGATACTTCTTTTCCTCGTTGCTACAATATTAGCAACATGCCATGGCTCCTCAGACCATGGCGTTTCCTTCAATGTCTTCCCTCTCCGGATGAAAACTGGCTCCGGTGGCCACTACATTCCTGATGTATCTTGCGCTAGTTGGACACTTGGTGTGGAAGCACACAACATAATTAACTGGAAAACTATTCCAGAAGAATGTGAAGGATATGTAGGTAACTACATGATAGGCCAACAATACAGATCTGACTCCAAAACTGTGTGTAAACAAGCCTATTTTTATGCTAGGAGTCTCAATCTCCCTCGAGATGGCAAGAACATTTGGGTGTTTGACATAGATGAGACTTCACTGTCTAACCTCCCATACTATGCTGAACACGGTTTTGGATTGGAACTATATAACGACACGGCGTTTAATCTATGGGTTGACCGTGCCGCCGCACCTGTACTGCCGGAGTCTCTGAAACTGTACAACAAACTCTTGTCTCTTGGCATCAAGATTGCATTCTTAACAGGAAGACCATTGTCTCAAAAGGACAATACTGCTAAGAACTTAAAGCTTGCTGGGTTCTACACTTGGGAAAAGCTCATTCTCAAGGAACCATCAACATATTCTGGTAAAACAGCAGTTACATACAAATCAGCGGAGAGAAAGAAACTGGAGGAAGAAGGATACAGAATCATTGGAAACATTGGAGACCAGTGGAGTGATATCTTAGGAACCACCACAGGCAACAGGACTTTCAAGCTGCCTGATCCCATGTACTACATTAGTTGA 786 0.4326 MRMKILLFLVATILATCHGSSDHGVSFNVFPLRMKTGSGGHYIPDVSCASWTLGVEAHNIINWKTIPEECEGYVGNYMIGQQYRSDSKTVCKQAYFYARSLNLPRDGKNIWVFDIDETSLSNLPYYAEHGFGLELYNDTAFNLWVDRAAAPVLPESLKLYNKLLSLGIKIAFLTGRPLSQKDNTAKNLKLAGFYTWEKLILKEPSTYSGKTAVTYKSAERKKLEEEGYRIIGNIGDQWSDILGTTTGNRTFKLPDPMYYIS* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1997 261 CDD HAD_VSP 74 260 - -
Lja3g1997 261 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 4 260 - -
Lja3g1997 261 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 40 260 IPR005519 -
Lja3g1997 261 TIGRFAM plant-AP: plant acid phosphatase 46 260 IPR010028 GO:0003993
Lja3g1997 261 PIRSF VSP 1 261 IPR014403 -
Lja3g1997 261 Gene3D - 44 261 IPR023214 -
Lja3g1997 261 SUPERFAMILY HAD-like 102 258 IPR036412 -
Lja3g1997 261 PANTHER VEGETATIVE STORAGE PROTEIN 1-RELATED 4 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1997 Lja-Chr3 23076819 23085391 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1997 - - gmx:547669 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1997 3 23076819 23085391 Lja3g1997 3 23076819 23085391 ECH