Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1996 ATGTACAGAGCAGCAGCTTCATCTCTCAAGAGGGGTCTCAAGGGCCATGGTGGCAACTTGGGAGCCACTAGGTTTGTGACCTCGGCCGCCGCAGCTACAAGGGCTTCCTCTGGTGGTTTGTTTAGCTGGCTTACTGGAGAGCGTTCTAGCTCTCTTCCTCCTCTGGACACACCACTTAGTGGTGTTGTTCTCCCTGATCCACTGCCAGATTTTGTTGAAGCAAGCAAGACCAGTATCACAACTCTCCCCAATGGACTCAAAATAGCATCGGAGACCTCGCCGAACCCTGCAGCCTCAATTGGGTTATATATTGATTGTGGTTCCATCTATGAGACACCGTTGTCAAGTGGGGCTTCGCACTTGCTAGAGCGAATGGCTTTCAAGAGCACAGCAAACCGTAGCCATTTTCGTATTGTACGGGAAGTAGAAGCAATTGGTGGCAATATAGGGGCGTCAGCTTCTCGGGAGCAAATGGGCTACACATTTGATGCTTTAAAGAGCTATGTTCCAGAAATGGTTGAATTACTGATTGACTCCATAAGGAACCCAGCTTTCCTGGATTGGGAGGTCAATGAGGAGCTTCGAAAGGTGAAAGCAGAGCTTGTAGAACTCTCAAACAATCCCCAAGGCTTGCTTTTGGAAGCAGTTCACTCTGCTGGTTATTCTGGTGCATTGGCTTATCCTCTTTTGGCTCCTGAATCTGCACTGAACAGATTGGATGGCTCCATTTTAGAGGAATTCGTTGCTAAAAATTACACAGCACCTAGAATGGTCCTTGCAGCATCTGGAGTTGACCATGAAGAACTTGTATCTGTTGCTGAGCCACTTCTCTCTGATCTGCCAAGTGTGCCCCGTCCTGAAGAACTAAAATCTATCTATGTTGGGGGTGACTTTCGTCGTCAAGGTGAATCAGGGGGTAGTACACATGTTGCTATTGCTTTTGAAGTGCCTGGCGGCTGGCAAAAAGAGAAAGATGCTATAGTTTTGACTGTTCTACAGATGCTTATGGGAGGAGGTGGGTCATTCTCAGCAGGGGGGCCTGGGAAAGGAATGCACTCAAGGCTATATCTTCGTGTGCTGAATCTTCATCAGGAGATTCAATCTTTTTCTGCTTTCAACAGTATCTTCAACAATACAGGACTGTTTGGCATTTATGCAAGCACTAGCCCTGATTTTGTGCAAAAAACTCTGGAGATAGCAGCTACAGAACTCTTAGAAATTGCATCGCCTGGGAAAGTTTCGCAGGAACAGCTTGATCGTGCCAAAAAATCCACGAAGTCTGCAGTTTTAATGAATCTGGAATCTAGAATGATTGCATCAGAGGATATAGGAAGGCAGATTTTGACTTATGGAGAAAGGAAGCCTGTGGAGCAGTTCTTGAAGGCTGTTGATGCAATCACTTTGAATGATATCACTAAAATCTCTCAGAAGATTATTTCCTCACCCTTGACTATGGCATCATATGGGGATGTTGTTAATGTGCCCAGTTATGAATCTGTGAACAGAATATTCCATGCAAAATGA 1524 0.4567 MYRAAASSLKRGLKGHGGNLGATRFVTSAAAATRASSGGLFSWLTGERSSSLPPLDTPLSGVVLPDPLPDFVEASKTSITTLPNGLKIASETSPNPAASIGLYIDCGSIYETPLSSGASHLLERMAFKSTANRSHFRIVREVEAIGGNIGASASREQMGYTFDALKSYVPEMVELLIDSIRNPAFLDWEVNEELRKVKAELVELSNNPQGLLLEAVHSAGYSGALAYPLLAPESALNRLDGSILEEFVAKNYTAPRMVLAASGVDHEELVSVAEPLLSDLPSVPRPEELKSIYVGGDFRRQGESGGSTHVAIAFEVPGGWQKEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNLHQEIQSFSAFNSIFNNTGLFGIYASTSPDFVQKTLEIAATELLEIASPGKVSQEQLDRAKKSTKSAVLMNLESRMIASEDIGRQILTYGERKPVEQFLKAVDAITLNDITKISQKIISSPLTMASYGDVVNVPSYESVNRIFHAK* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1996 507 ProSitePatterns Insulinase family, zinc-binding region signature. 107 130 IPR001431 GO:0004222|GO:0006508
Lja3g1996 507 Pfam Peptidase M16 inactive domain 244 423 IPR007863 -
Lja3g1996 507 Gene3D - 291 504 - -
Lja3g1996 507 PANTHER METALLOPROTEASE 16 506 - -
Lja3g1996 507 Pfam Insulinase (Peptidase family M16) 88 232 IPR011765 -
Lja3g1996 507 Gene3D - 70 279 - -
Lja3g1996 507 SUPERFAMILY LuxS/MPP-like metallohydrolase 302 498 IPR011249 GO:0046872
Lja3g1996 507 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 16 506 IPR037715 GO:0006627
Lja3g1996 507 SUPERFAMILY LuxS/MPP-like metallohydrolase 76 286 IPR011249 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1996 Lja-Chr3 23067206 23072145 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1996 K01412 - gmx:100810990 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1996 3 23067206 23072145 Lja3g1996 3 23067206 23072145 ECH