Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1988 ATGACTATCATCATTGACCAACCTGATCACTTTGGGTCTGATGTAGAGGGAAAGACGGTACCAATAGATGAGAAGGAACTGGTGTTGGACGGTGGATTTGTGATGCCACATACCAACTCATTTGGGCACACTTTTAGGGATTACAATGCTGAAAGTGAGAGGCAAGAAGGAGTGGAGAACTTCTACAGGAAAAATCACATTTATCAATCCGTTGATTTCGTGAAGAAAATGAGAGAGGAATATGGAAAACTGAACAGGGTGGAGATGAGCATGTGGGAATGTTGTGAGCTTCTTAATGAAGTGGTGGATGAGAGTGACCCTGATTTGGATGAACCTCAGATTGAGCACTTGCTACAGACAGCTGAAGCTATAAGGAAGGACTACCCAAATGAAGATTGGCTTCATTTAACTGGCCTTATCCATGACCTTGGCAAGGTGCTTCTGCTCCCCGTTTTTGGAGGACTTCCTCAATGGGCTGTAGTAGGTGACACATTCCCAGTTGGTTGCAGATTTGATGAGTCCATTGTTCATCACAAGCATTTTAAGGAGAACCCAGACTACAACAACCCTGCATACAACACTAGATATGGGATGTACTCAGAGAAATGTGGACTTAACAACGTGCTGATGTCATGGGGACATGATGACTACATGTATCTTGTGGCAAAGGAGAATAAGACTACTCTGCCTTCAGCTGCTCTGTTCATTATCAGATACCATTCATTCTATGCTTTACATAGGGAAGGAGCCTATAAGCACTTGATGAATGAAGAGGATTTTGAGAATCTGGAATGGCTCCACATTTTCAACAAATACGACCTCTATAGCAAGAGCAAAGTTCGAATTGATGTTGAAAAGGTCAAGCCATACTATCTCTCTCTCATTGAAAAGTACTTTCCTGCAAAGCTAAAGTGGTGA 918 0.4248 MTIIIDQPDHFGSDVEGKTVPIDEKELVLDGGFVMPHTNSFGHTFRDYNAESERQEGVENFYRKNHIYQSVDFVKKMREEYGKLNRVEMSMWECCELLNEVVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLLPVFGGLPQWAVVGDTFPVGCRFDESIVHHKHFKENPDYNNPAYNTRYGMYSEKCGLNNVLMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHREGAYKHLMNEEDFENLEWLHIFNKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1988 305 PANTHER MYOINOSITOL OXYGENASE 1 305 IPR007828 GO:0005506|GO:0005737|GO:0019310|GO:0050113
Lja3g1988 305 PANTHER INOSITOL OXYGENASE 1 1 305 - -
Lja3g1988 305 SUPERFAMILY HD-domain/PDEase-like 48 305 - -
Lja3g1988 305 Pfam Myo-inositol oxygenase 56 305 IPR007828 GO:0005506|GO:0005737|GO:0019310|GO:0050113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1988 Lja-Chr3 22942239 22946325 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1988 K00469 - gmx:100809388 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1988 3 22942239 22946325 Lja3g1988 3 22942239 22946325 ECH