Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1982 ATGGCCTGTGTTCTGAGTTCTTCTTCTACCATTGTTGCGTCCTATGCACTCAGGAATGAACCTCAGCTTTACCCCGTGTGGTTTTCTTGCATTCGCCCTGGAAACCTGCCTAGAAACCATTTTCAGCTCAAATCCTCAAATGGGCACCCGCTAAATGCTGTTTCTTCTCATTCTCATGATGCTGGAAGCTCATTGACCAAAGAAGATAGCAAGCCCCAACCAGTTGATGGACCATTTCTCTCCTCAGACTCAGAATGCACTGGATCCAACCTTAGCATAACTGTTGTTGGAGCTTCTGGAGACCTTGCCAAAAAGAAGATTTTTCCAGCTCTTTTTGCTCTTTTTTATGAAGATTGCCTACCAGAGAACTTCCTGGTGTTTGGATTTGCTCGGACCAAAATGACCAGTGAAGAATTAAGGAACATGATTAGCAGGACTTTAACATGCAGAATTGATAAGAGGGCAAACTGCGAAGATAAAATGGATCAGTTCTTGAAAAGATGCTTTTACCATTCTGGTCTATACAATTCTGAGGGCAGCTTTTCAGATTTGGATTGCAAGATGAAGGAGAAAGAGGGTGGAAAACGTTCAAACAGGTTGTTTTATTTGTCAATACCTCCAAACATATTTGTGAATGTGGTGAGATGTGCTAGCCTTAAAGCTTCTTCAAAAAAGGGCTGGACAAGGGTTATTGTTGAAAAGCCATTTGGTCGTGACTCGGAATCATCTAACGAGCTAACAAGATGTTTGAAGCAGTACCTCACTGAAGATCAGATATTCAGGATTGACCATTACTTGGGTAAGGAGCTCGTGGAGAATCTATCTGTGCTTCGCTTTTCAAACCTTGTTTTTGAGCCTCTATGGTCCCGGGCTTACATTCGCAATGTACAATTTATATTTTCTGAAGATTTTGGGACAGAGGGCAGAGGAGGTTATTTTGATAACTACGGAATCATTCGCGATATAATGCAAAATCATCTTCTGCAAATACTAGCGTTGTTTGCAATGGAACCACCTGTCAGCTTGGATGCTGAGGACATTAGAAATGAAAAGGTTAAGGTTCTGAGATCAATGAGACCACTGCAGCTTGAAAATGTTGTTACCGGTCAATATAAGGGCCACAGCAAAGGTGGTAAATCATATCCAGGTTATGCAGATGATCCAAGTGTTCCGAAGGGTAGTCTTACTCCGACATTTGCAGCAGCAGCTCTTTTTATTGACAATGCTAGATGGGATGGGGTTCCTTTTCTCATGAAAGCTGGCAAGGCTCTACATACTAAACGTGCAGAAATCAGAGTACAATTCAGACATGTCCCAGGTAACTTGTATAAGCGAAATTTTGGAGCTGATATGGATAAGGCTACAAATGAGCTTGTGCTTCGTGTACAACCTGATGAAGCTATATATTTGAAGGTCAACAACAAAATTCCGGGTCTAGGAATGAGATTAGACAGGAGTGACCTCAATTTGCTTTACCGAGCAAGGTATCCAACGGAAATTCCAGATGCATATGAGAGGTTACTCTTAGATGCTATTGAAGGCGAGCGGAGGCTGTTCATTAGAAGTGACGAGCTAGATGCAGCTTGGGCACTATTCACTCCTTTGCTTAAAGAAGTAGAAGACAAGAAGATTGCTCCAGAGCTCTATCCCCATGGTAGCAGAGGACCAATTGGAGCACATTACCTTGCCGCAAAGCACAATGTACGATGGGGAGATACTGGTAATGATGACTGA 1734 0.425 MACVLSSSSTIVASYALRNEPQLYPVWFSCIRPGNLPRNHFQLKSSNGHPLNAVSSHSHDAGSSLTKEDSKPQPVDGPFLSSDSECTGSNLSITVVGASGDLAKKKIFPALFALFYEDCLPENFLVFGFARTKMTSEELRNMISRTLTCRIDKRANCEDKMDQFLKRCFYHSGLYNSEGSFSDLDCKMKEKEGGKRSNRLFYLSIPPNIFVNVVRCASLKASSKKGWTRVIVEKPFGRDSESSNELTRCLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLVFEPLWSRAYIRNVQFIFSEDFGTEGRGGYFDNYGIIRDIMQNHLLQILALFAMEPPVSLDAEDIRNEKVKVLRSMRPLQLENVVTGQYKGHSKGGKSYPGYADDPSVPKGSLTPTFAAAALFIDNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGADMDKATNELVLRVQPDEAIYLKVNNKIPGLGMRLDRSDLNLLYRARYPTEIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKEVEDKKIAPELYPHGSRGPIGAHYLAAKHNVRWGDTGNDD* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1982 577 MobiDBLite consensus disorder prediction 52 83 - -
Lja3g1982 577 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 80 576 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja3g1982 577 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 87 276 IPR036291 -
Lja3g1982 577 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 95 273 IPR022674 GO:0006006|GO:0016614|GO:0050661
Lja3g1982 577 Gene3D - 87 261 - -
Lja3g1982 577 PIRSF G6PD 66 574 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja3g1982 577 PRINTS Glucose-6-phosphate dehydrogenase signature 229 242 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja3g1982 577 PRINTS Glucose-6-phosphate dehydrogenase signature 323 339 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja3g1982 577 PRINTS Glucose-6-phosphate dehydrogenase signature 410 436 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja3g1982 577 PRINTS Glucose-6-phosphate dehydrogenase signature 253 281 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja3g1982 577 PRINTS Glucose-6-phosphate dehydrogenase signature 305 322 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja3g1982 577 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC 80 576 - -
Lja3g1982 577 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 276 570 IPR022675 GO:0004345|GO:0006006|GO:0050661
Lja3g1982 577 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 263 570 - -
Lja3g1982 577 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 90 572 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja3g1982 577 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 91 571 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja3g1982 577 Gene3D Dihydrodipicolinate Reductase; domain 2 262 571 - -
Lja3g1982 577 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 263 269 IPR019796 GO:0004345|GO:0006006
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1982 Lja-Chr3 22872112 22878115 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1982 K00036 - gmx:100801945 1015.76