Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1977 ATGAGCGAGGCCGCAGCAAAACGACAAGGTGGGAGGCCGTTGCCTCCGCCTCCAAGAGGCCCTCCTCCCCATGCTTCACGACCTCGCCCCGACCCCGTCGATCGCGAAAAGACATGCCCTTTGTTGCTCCGAGTCTTCACTAAGATTGGAGGTCATCATACAATGGAAGATTTCGCTGTCAGAGGGAAAGAGCCCAAGGACGAGGTTCAGATTTATACCTGGAAGGACGCTACTCTCAGAGAGTTAACTGATCTCGTCAAAGAAGTGGCTCCAGCTGCAAGAAGGAGAAATGCAAAGCTTTCATTTGCCTTTGTGTTTCCTGATAAAAATGGCCGTTTCAAAGTTCAAGAGGTGGGCAAGACATTATCGTTTGGTACTGGTAGATTAGATGATGGCAAGGCTTTAGCTGACCTTGGTTTTGAGATTGGTGATTACTTGGATGTGTCTATTATTGTGTAG 459 0.488 MSEAAAKRQGGRPLPPPPRGPPPHASRPRPDPVDREKTCPLLLRVFTKIGGHHTMEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRNAKLSFAFVFPDKNGRFKVQEVGKTLSFGTGRLDDGKALADLGFEIGDYLDVSIIV* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1977 152 PANTHER DEACETYLASE COMPLEX SUBUNIT SAP18, PUTATIVE-RELATED 2 151 - -
Lja3g1977 152 PANTHER SAP18 2 151 IPR010516 -
Lja3g1977 152 MobiDBLite consensus disorder prediction 11 27 - -
Lja3g1977 152 Gene3D ASAP complex, SAP18 subunit 22 152 IPR042534 -
Lja3g1977 152 Pfam Sin3 associated polypeptide p18 (SAP18) 32 150 IPR010516 -
Lja3g1977 152 MobiDBLite consensus disorder prediction 1 37 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1977 K14324 - gmx:100526922 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1977 3 22756748 22760365 Lja3g1977 3 22756748 22760365 ECH