Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1976 ATGGGTTCTGAAGGGGAATTCACAGAAAACGAGAAGCCAACGCAAACGGACCAACCCGATAACCAACTTCACTGTGATATTGATTCACCCGAAAATCGCGCTAACAGTTATGAAGCCGTTACTAACAAACCAGTTAGTTACGGGGTTGGAATTCATGCTGATTGCGATGTCAAACCAGTAATCGTTCAGCCCCATTTACTTCTCCCGATTCCGGTGCCACCGGAGTTTTTCAGAGCCACCATAATCTCCGACGCTCCGCCAACCTTCTCCGCCGCCGCCACCATGCCGTCCATCGGAAGCTACCTGCGCCAGCGGAGCAACGACTTGTCAGCAGCGATCACAAAGCGAGTCTCATCCTTCCGGCAGGAGGAGGATGACGAGGCGAAGAAGAAAGAGCCGGAAGTGACGGAGTTTAGCCTCGCCGGCGTCAAGGTCGTGGTGCAGGTGAAACCGGAGGAGGAGGAACCTACGGTGAAAGGGCGGATCAGCTTCTTCTCGAGGTCCGGTTGCCGGGACTGCACGGCGGTGCGGAGATTCTTCAGGGAGAAACGACTCAAGTTCGTGGAGATCAACGTCGACGTGTACAGAGAGAGGGAGAAGGAGCTGCGAGAGAGAACAGGAAGCGCTACGGTGCCGCAGATTTTCTTCAACGAGAAGCTGATTGGAGGTTTGGTGGAGCTGAACACTTTACGAAACAACGGCGAGTTTGAACAGAAGGTGGCGGAGCTGGTGGCGGAGAATCTCCCCGGCGATGACGCACCAGCGCCGCCGGTGTACGGGTATGATGCTCCGGAGGAGGTTCGGACGGACGAGATGGCGGGGATCGTTGGAATTTTGCGGCAGAGATTGGTTGTTCAGGATCGGTGGAAGAAGATGAAGGTTGTTAAGAACTGCTTCGATGGGAATGAGATGGTGGCGGTTGTGGTTCAGCATCTCAATTGCGCGCGTAACGAGGCAATCGAGATTGGAAGACGGTTATCCAGGAAGCACTTCATCCATCATGTTTTCGGGGAAAATGATTTTGAGGAGGGAAATCACTTATATCGTTTCCTTGAGCAAGAACCATTTATCCCCAGATGCTATAATTTTTGCGGCGCCACAAAAGATTCTGAGCCAAAGCCTGTAGCTGAAATTTGTGAAAGGCTTACCAAGATCATGTCTGCCATCCTTGAGTCTTATGCTTCTGATGATAGGCAACATGTTGACTATGAAGCCATTAGCAAAAGCGAAGAATTTCGTAGGTATGTTAATCTGACCCAGGATCTGCAGCGAGTGAATCTCTTGGAACTATCAGAAAATGACAAGCTTGCGTTCTTCTTAAATTTGTACAATGCCATGGTCATCCATGCTGTCATCAGGGTAGGGTGCCCAGAAAGTTTGATTGATAGGAGATCATTCTTCAATGATTTCCTGTATTTGGTTGGAGGACATCCTTATTCCCTCACTGATATTAAAAATGGTGTCCTCAGATGCAATCGGAGGACACCGTATTCCTTGCTGAAGCCCTTTAGTGCAGGAGACAGGCGGTTAGAGGTTGCTCTTGTCAAGCTTAATCCGTTATTTCACTTTGGACTTTGTAATGGTACAAAATCCAGCCCAAATGTGAGGTTCTTCTCTTCTGATAGAGTTGTTGATGAATTAAGAGGTGCTGCAAGAGAATTCTTTGAGAAAGATGGTTTTGAAGTGGACCTAGAGAAGAGAACGGTTTATCTCACTCGAATTTTCAACTTGTTCAGTGGAGATTTTGGAACTGAGAAAGACATCTTAAAGTGGATAATTAATTACTCGGATCCAAATAAAGCTGGTCTGTTGACACATCTCTTAGGTGATGGTGGACCTGTTAATATATCGTACCAAAATTTTGATTGGTCGATAAATTCTTGA 1884 0.4788 MGSEGEFTENEKPTQTDQPDNQLHCDIDSPENRANSYEAVTNKPVSYGVGIHADCDVKPVIVQPHLLLPIPVPPEFFRATIISDAPPTFSAAATMPSIGSYLRQRSNDLSAAITKRVSSFRQEEDDEAKKKEPEVTEFSLAGVKVVVQVKPEEEEPTVKGRISFFSRSGCRDCTAVRRFFREKRLKFVEINVDVYREREKELRERTGSATVPQIFFNEKLIGGLVELNTLRNNGEFEQKVAELVAENLPGDDAPAPPVYGYDAPEEVRTDEMAGIVGILRQRLVVQDRWKKMKVVKNCFDGNEMVAVVVQHLNCARNEAIEIGRRLSRKHFIHHVFGENDFEEGNHLYRFLEQEPFIPRCYNFCGATKDSEPKPVAEICERLTKIMSAILESYASDDRQHVDYEAISKSEEFRRYVNLTQDLQRVNLLELSENDKLAFFLNLYNAMVIHAVIRVGCPESLIDRRSFFNDFLYLVGGHPYSLTDIKNGVLRCNRRTPYSLLKPFSAGDRRLEVALVKLNPLFHFGLCNGTKSSPNVRFFSSDRVVDELRGAAREFFEKDGFEVDLEKRTVYLTRIFNLFSGDFGTEKDILKWIINYSDPNKAGLLTHLLGDGGPVNISYQNFDWSINS* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1976 627 ProSiteProfiles Glutaredoxin domain profile. 150 247 - -
Lja3g1976 627 MobiDBLite consensus disorder prediction 1 30 - -
Lja3g1976 627 CDD DEP 279 349 - -
Lja3g1976 627 PANTHER F26K24.21 PROTEIN 19 627 - -
Lja3g1976 627 Gene3D Glutaredoxin 156 243 - -
Lja3g1976 627 SMART DEP_3 279 352 IPR000591 GO:0035556
Lja3g1976 627 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 19 627 - -
Lja3g1976 627 ProSiteProfiles DEP domain profile. 279 352 IPR000591 GO:0035556
Lja3g1976 627 Pfam Protein of unknown function, DUF547 429 554 IPR006869 -
Lja3g1976 627 SUPERFAMILY "Winged helix" DNA-binding domain 270 365 IPR036390 -
Lja3g1976 627 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 284 350 IPR000591 GO:0035556
Lja3g1976 627 Gene3D - 271 409 IPR036388 -
Lja3g1976 627 MobiDBLite consensus disorder prediction 8 30 - -
Lja3g1976 627 SUPERFAMILY Thioredoxin-like 159 241 IPR036249 -
Lja3g1976 627 Coils Coil 185 205 - -
Lja3g1976 627 Pfam Glutaredoxin 164 221 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1976 Lja-Chr3 22750576 22755169 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1976 - - gmx:100810111 868.226