Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1969 ATGGAGGCTTATAAGAGATGGGTCAGGCAGAACAAAGACTATGTGCACTCCCTCGAGTCCTTGGCCAATGGATTGACATGGCTTCTTCCTGAACGCTTCTCTGAATCAGAGATTGGACCAGAAGCAGTGACGACCATTCTAGGAATTATCACAGCTATCAATGAGCATATAATTGATACTACTCCTAACCAAAATGTTACAGGCTCTGTTGAGCCCAATTCATTTCCTTATCCATTATGCTTATCTGCATTGAAGGATTTGGAAACATTAGTTGAAGTTGTGGCACAACATTACTATGGTGATGATAAGAAATGGAATTTCCTTGCTGTTACCGAAGCAATCAAGGTACTGGTTCGGTTATCTTTGTTTCGGAAGAGTGGGTATAAAATGTTGTTATCTGGCGGGGAGACATCTAATGATGCTATTGCTTCGGATAGTTCTACTTCACAACATCAAATAGGCTCACAGCTCGATGGGCATCGAGGGTCTGGTCATATGAGAAACAATCTTGGTACAAACCCATGGAATCTGGAAGGAAGAGCACTATCTGCTTTAAATAAATTTGGAGAAAATGCCATGACAGCATCCGATCCAGTGTGGTTACGTAGGGTTCAACACCAACAATCAATCATGGAGCCTCTTGCTTCAAAGGCAGTGAGACCAACACTTTCCACCGTGTTGGCCAAAGGGGGTGTTCGCGGGGCTTTCTTTATTATTGGAGAAGTTCTATTTATTACTAGACCACTTATCTATGTTTTATTCATTCGAAAGTATGGTAGTCGGTCATGGACCCCTTGGTTCCTTTCACTGGCTATTGACTGCATAGGGCATAGTATTCTTTCAATTGTTACGACAACAGTGGCGGGTGAAAAGGAGAAAATGTTCCATCTTTCTGCCCCAGAAAAGGATGAGGTTAAACGACGGAAGCTTTTATTTGCACTTTACCTGATGAGAGATCCATTTTTCAGCAAGTATACTAGGCGACGACTTGAAAGCACTGAGCAGGTTTTGGAACCTGTACCTATCATAGGATTTCTTACGGCGAAAATTGTTGAGCTTGTGATTGGAGCTCAGACACGATACGCTTACATGTCAGGATCATGA 1104 0.4248 MEAYKRWVRQNKDYVHSLESLANGLTWLLPERFSESEIGPEAVTTILGIITAINEHIIDTTPNQNVTGSVEPNSFPYPLCLSALKDLETLVEVVAQHYYGDDKKWNFLAVTEAIKVLVRLSLFRKSGYKMLLSGGETSNDAIASDSSTSQHQIGSQLDGHRGSGHMRNNLGTNPWNLEGRALSALNKFGENAMTASDPVWLRRVQHQQSIMEPLASKAVRPTLSTVLAKGGVRGAFFIIGEVLFITRPLIYVLFIRKYGSRSWTPWFLSLAIDCIGHSILSIVTTTVAGEKEKMFHLSAPEKDEVKRRKLLFALYLMRDPFFSKYTRRRLESTEQVLEPVPIIGFLTAKIVELVIGAQTRYAYMSGS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1969 367 PANTHER UNCHARACTERIZED 1 367 IPR013919 -
Lja3g1969 367 MobiDBLite consensus disorder prediction 139 169 - -
Lja3g1969 367 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX16 1 367 - -
Lja3g1969 367 MobiDBLite consensus disorder prediction 139 157 - -
Lja3g1969 367 Pfam Peroxisomal membrane protein (Pex16) 2 358 IPR013919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1969 Lja-Chr3 22599264 22601880 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1969 K13335 - gmx:100793724 597.43