Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1967 ATGGCGGATCAAGTAGAAGGAACGGTGCAGAACGTTCTGGAACAAGAGTCTCTCAAGTGGGTCTTCGTCGGCGGCAAAGGCGGCGTCGGAAAAACCACTTGCAGCTCCATCCTCTCCATCCTTCTCGCCTCCGTCCGCTCCTCCGTTCTCATCATCTCCACCGACCCCGCTCACAATCTCAGCGACGCTTTCCAACAACGCTTCACCAAAACCCCCACTCTCGTCAATGGCTTCTCCAATCTCTATGCCATGGAGGTGGATCCTGCTGTTGAGCATGAGGACATGGGTAGTTCTGATGGGATGGATAGTTTGGTCTCAGAGCTAGCTGGTGCTATTCCTGGAATTGATGAGGCCATGAGCTTTGCTGAGATGCTCAAATTGGTGCAGACAATGGATTATTCTGTTATTGTATTTGATACTGCTCCCACTGGCCATACACTTAGACTGTTGCAATTCCCATCAGTTTTAGAAAAGGGTCTTGCAAAAATGATGTCTTTGAAAAATAAGTTTGGTGGTTTATTTAATCAGATGACTCGGATGTTTGGCATGGGTGACGATTTTGGTGAAGATGCAATTCTTGGGAAGCTTGAAGGCATGAAGGATGTAATTGAACAAGTTAATAAGCAATTCAAAGATCCAGATATGACAACCTTTGTATGTGTTTGCATTCCCGAATTCCTCTCACTATATGAAACAGAGAGATTGGTTCAGGAACTTACGAAGTTTGAGATTGACACGCACAATATCATCATTAATCAAGTAATCTTTGACGATGAAGATGTTGAATCCAAGTTACTTAAAGCAAGAATGAAAATGCAGCAGAAGTATCTGGACCAGTTTTACATGTTGTATGATGACTTTAACATTACGAAACTGCCATTGCTCCCAGAAGAGGTTACCGGCGTTGAAGCTCTAAAAGCGTTTTCGAGACATTTCACGACACCGTATCAACCCTTAGCTAGTAGAGACCAAGTAGAACGGTTAGAGCAGAGAGTATCAGGACTACAACACCAGTTAAAAGAGGCTGAAGAAGAATTGGAGAGAGTCAAAAGAGGGAAGCACAGGGCTTGA 1071 0.4426 MADQVEGTVQNVLEQESLKWVFVGGKGGVGKTTCSSILSILLASVRSSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPAVEHEDMGSSDGMDSLVSELAGAIPGIDEAMSFAEMLKLVQTMDYSVIVFDTAPTGHTLRLLQFPSVLEKGLAKMMSLKNKFGGLFNQMTRMFGMGDDFGEDAILGKLEGMKDVIEQVNKQFKDPDMTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVIFDDEDVESKLLKARMKMQQKYLDQFYMLYDDFNITKLPLLPEEVTGVEALKAFSRHFTTPYQPLASRDQVERLEQRVSGLQHQLKEAEEELERVKRGKHRA* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1967 356 Gene3D - 1 343 IPR027417 -
Lja3g1967 356 Coils Coil 325 356 - -
Lja3g1967 356 Pfam Anion-transporting ATPase 19 311 IPR025723 -
Lja3g1967 356 TIGRFAM GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 22 310 IPR016300 GO:0005524|GO:0016887
Lja3g1967 356 Hamap ATPase <gene_name> [GET3]. 5 320 IPR027542 GO:0005524|GO:0016887
Lja3g1967 356 CDD ArsA 34 309 - -
Lja3g1967 356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 308 IPR027417 -
Lja3g1967 356 PANTHER ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE 3 355 IPR016300 GO:0005524|GO:0016887
Lja3g1967 356 PANTHER ATPASE LOC107826790 3 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1967 Lja-Chr3 22585911 22595005 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1967 K01551 - gmx:100816517 636.721