Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1966 ATGGCTTTGAACTACCCCATCAGAAAGGGACCACCAATCTTCTTCTTGATCTTAAATTCAAAAGCCATAGCTGATGCAGCTTCATGCTACTGTGCTTTTGTTCTCGTGGCCCTCCTCCTACTAAGCATATCAGGATCAGACACCACCTCTCATGATCTTCATCTTCCAAATCATATCATCATGTCCCGGCGGCCTCCATGTGATGAAATCTATGTGGTTAGAGAAGGTGAGACACTTCACACGATCAGTGACAAGTGTGGTGACCCCTTTATAGTGGAGAATAACCCTCATATCCATGACCCTGATGAAGTCTTCCCTGGTCTCGTTATCAAGATAATTACGCCGCCTTCACATTCATCATAG 363 0.449 MALNYPIRKGPPIFFLILNSKAIADAASCYCAFVLVALLLLSISGSDTTSHDLHLPNHIIMSRRPPCDEIYVVREGETLHTISDKCGDPFIVENNPHIHDPDEVFPGLVIKIITPPSHSS* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1966 120 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN PROTEIN 2 116 - -
Lja3g1966 120 Gene3D LysM domain 61 120 IPR036779 -
Lja3g1966 120 CDD LysM 70 112 IPR018392 -
Lja3g1966 120 Pfam LysM domain 71 112 IPR018392 -
Lja3g1966 120 PANTHER EMBRYO SAC 1 2 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1966 Lja-Chr3 22584212 22584627 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1966 - - gmx:100815990 134.42