Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1944 ATGGAGGCGAAACCTTCCTCTGGTACTGAAAGTGCGTCGTCGTGTGCCTCGCCATCACTGAAAATCTCGTCGGAATTGGACCCTCGACATGCTTCTGAGACCCTCACCTTCGTTACCCGCATGGGTGGCGGTGTCTCCATTCCTCAAAACTGCAACACCAATGGCTTCTATGACGCCTTCATTCGCAGCTTCATCAAGGTCGATCACATCCAACGGGGACGAATCTCTTGCACTATCATCGCCAAACCACCTATCTGTAATGGCTATGGAACCCTTCATGGAGGGGCTGTTGGGGTCTTGGTTGAGGTTTTGTCGACTGCTTGTGCTAGAACTGTAGTTGCTGAAGACAAGCAACTTTCTCTTGGAGAAGTTAGCATTTCTTATCTCTCTGGCACTCCAGCAAATGAAGAAGTGCTAGCTAATGCCTCTGTAGTGAAGACTGGAAGAAATTTGACTGTAGTTGCACTTGAGTTTAAATCAAAGAAAAATGGGAATTTGCTGTATATTACTCACGCCACGTTCTATAACATGCCAGTTTCCAGCTTATGA 549 0.4699 MEAKPSSGTESASSCASPSLKISSELDPRHASETLTFVTRMGGGVSIPQNCNTNGFYDAFIRSFIKVDHIQRGRISCTIIAKPPICNGYGTLHGGAVGVLVEVLSTACARTVVAEDKQLSLGEVSISYLSGTPANEEVLANASVVKTGRNLTVVALEFKSKKNGNLLYITHATFYNMPVSSL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1944 182 PANTHER OS07G0462700 PROTEIN 15 182 - -
Lja3g1944 182 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 65 175 IPR029069 -
Lja3g1944 182 MobiDBLite consensus disorder prediction 1 26 - -
Lja3g1944 182 MobiDBLite consensus disorder prediction 1 21 - -
Lja3g1944 182 Pfam Thioesterase superfamily 89 163 IPR006683 -
Lja3g1944 182 PANTHER THIOESTERASE SUPERFAMILY MEMBER-RELATED 15 182 IPR039298 GO:0047617
Lja3g1944 182 TIGRFAM unchar_dom_1: uncharacterized domain 1 65 163 IPR003736 -
Lja3g1944 182 CDD PaaI_thioesterase 65 175 - -
Lja3g1944 182 Gene3D Hotdog Thioesterase 46 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1944 Lja-Chr3 22336530 22339500 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1944 K17362 - gmx:100499764 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1944 3 22336530 22339500 Lja3g1944 3 22336530 22339500 ECH