Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1939 ATGGAGATCACCAAACCAAGGACCCTAGAGCTCACGATTTTATCAGCGGAGGATCTCCGCGTCGACCGAAAGCCGGCGACGCGGGACGTCTTCGTGGTGGTTCAAGCGGAATCCACCCACGCCACGGCAGTAAGCGGCGACGAATACGGCGGAGGATTCCACTCATGGAACCAGAAATTCTCCGTGAATTTGAACATGAACACGAAGTTCATCACGTTCGAGGTGAACTGCAAAACGAGATCTGGATCGGTGAAGGACATTGGTGTGGTGAGGATTCCGGTTTCGGATTTTCTTGGAGGTTTGGTTCCTGACACGTTCTTGCGGTTTTTGAGTTACAGGTTGAAGGATCGGTATGGGAATCCCAACGGGATCATCAATTTCTCCGTCAGGGCGGTGTCGCCTGGTGGAAAGAGTGGTGGTGGTGGTGGTGGTGGTGGTTCGACGGCTGTGGACAAGGTTGATGGTTTTTCGGTGCCGGCGGCGGCGGCTGATAAGATTGGCGGTGGTTCTTGTGGTGGTTCTCAGGTTCCGGCGGGTGGAGTGGTTACCGGCATTCCCGTTTCGTGGAATCACGCTAAAAACGTTTGA 588 0.5425 MEITKPRTLELTILSAEDLRVDRKPATRDVFVVVQAESTHATAVSGDEYGGGFHSWNQKFSVNLNMNTKFITFEVNCKTRSGSVKDIGVVRIPVSDFLGGLVPDTFLRFLSYRLKDRYGNPNGIINFSVRAVSPGGKSGGGGGGGGSTAVDKVDGFSVPAAAADKIGGGSCGGSQVPAGGVVTGIPVSWNHAKNV* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1939 195 CDD C2_SRC2_like 8 127 IPR044750 GO:0006952
Lja3g1939 195 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 6 192 - -
Lja3g1939 195 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Lja3g1939 195 SMART C2_3c 8 106 IPR000008 -
Lja3g1939 195 Gene3D C2 domain 7 130 IPR035892 -
Lja3g1939 195 PANTHER INGRESSION PROTEIN FIC1 6 192 - -
Lja3g1939 195 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 133 IPR035892 -
Lja3g1939 195 Pfam C2 domain 8 99 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1939 Lja-Chr3 22314704 22315505 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1939 - - adu:107473351 158.303