Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1912 ATGAACAAGGACAACCACAGATATCTCAAACTCTTCTGGGGAACTTCTAATCAACACAAGTTTAAGAAGCCAAAAGCTACAACAAAAACAGTTACTACCACCGTGATTGTGGTGTTTTGCTTAGCAGCAACTTTCTGTGCTTTAGCAGCCTGGATTTCCTCCCCATTTGCAGGTGCTTGCATTCCAAACCAGAACCTCCCAGCCACTCACCTAGCCAAACCCCAAGAATCACAAGAGTTTTCTCTTAGATGCACCAAAAGTAAGAACAACAAAGAGACAAAACAAACCTGCCCAAGAGACAACTACCCCACCTCACATAGCCCTAGCAATCCACAGAACCTGACATGTCCCTCATACTTCAGATGGATCCATGAAGATCTAAAACCATGGAAAGAGAAAGGAGGGATCACAAGGCAGATGTTGGAAGGTGTAAGAAGGACAGCACACTTCAGGCTTGTGATTGTGGATGGGAAAGTGTATGTGGAGAAGTTTAGACAGTCTATTCAGACAAGAGATGTGTTTACATTGTGGGGAATTTTGCAGCTTCTGAGAGTGTACCCTGGAAAGTTGCCTGATTTGGAGCTCATGTTTGATTGTGATGACAGGCCTGTCATTCACTTGGCCAATTTTCAAGGCCCAAAAGCTGCCCCACCACCATTGTTTAGATATTGTTCTGATCAGGGGAGCTTGGATATTGTTTTCCCTGATTGGTCCTTTTGGGGATGGGCTGAGACAAATATAAGGCCATGGAGAGAGGTCCTGAAAGATATCAAAGAAGGAAACAAGAGGACCAAGTGGGAGGACAGAGTACCCTACGCTTATTGGAAGGGAAACCCTCATGTGGCTCGTACTAGGCAAAACCTTCTGAAATGCAATGTTACTCCACAAAATGACTGGAACACTCGCCTATACATACAGGACTGGTCACAAGAATCTAATCAAGGGTACAAGAAATCCAACGTAGCGGACCAATGCACTCATAGGTATAAGATATACATAGAAGGATGGGCTTGGTCTGTTAGTGAGAAATACATTATGGCATGTAATTCTATGTCATTATATGTCAAGTCTAGCTACCATGACTTTTTCATCAGAGGCATGAAGCCATTACAGCACTATTGGCCCATAAGAGACAACAGCAAATGCACATCTCTTAAGTATGCAGTGGAATGGGGCAACAACCACACTGATAAGGCACAAGCAATAGGGGAGGCTGCTAGCAGATTCATACAAGAGGACTTAGACATGGATCATGTATACGACTACATGTTTCATCTACTGAATGAATATGCAAAGCTCTTAAAGTTCAAACCAACTGTCCCTCCAGGAGCTGTGGAGTTTTGTCCTGAAACATTGGCATGTGCTGTAAATGGTACACAGAGAAGGTTCATGGAGGAGTCAATGGTGAAGTTTCCTAGTCACTCAAATCCATGCACTATTCCTCCTCCATATGATCCTTCAACCTTCCAAAGCTTTCAAGAGGAAAAAGCTAATGCAACAAGACAGGTTGAAATTTGGGAAGATAAATACTGGCTTAAGAAAAATTAG 1548 0.4309 MNKDNHRYLKLFWGTSNQHKFKKPKATTKTVTTTVIVVFCLAATFCALAAWISSPFAGACIPNQNLPATHLAKPQESQEFSLRCTKSKNNKETKQTCPRDNYPTSHSPSNPQNLTCPSYFRWIHEDLKPWKEKGGITRQMLEGVRRTAHFRLVIVDGKVYVEKFRQSIQTRDVFTLWGILQLLRVYPGKLPDLELMFDCDDRPVIHLANFQGPKAAPPPLFRYCSDQGSLDIVFPDWSFWGWAETNIRPWREVLKDIKEGNKRTKWEDRVPYAYWKGNPHVARTRQNLLKCNVTPQNDWNTRLYIQDWSQESNQGYKKSNVADQCTHRYKIYIEGWAWSVSEKYIMACNSMSLYVKSSYHDFFIRGMKPLQHYWPIRDNSKCTSLKYAVEWGNNHTDKAQAIGEAASRFIQEDLDMDHVYDYMFHLLNEYAKLLKFKPTVPPGAVEFCPETLACAVNGTQRRFMEESMVKFPSHSNPCTIPPPYDPSTFQSFQEEKANATRQVEIWEDKYWLKKN* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1912 515 MobiDBLite consensus disorder prediction 91 110 - -
Lja3g1912 515 SMART cap10 189 437 IPR006598 -
Lja3g1912 515 Pfam Glycosyl transferase family 90 113 507 IPR006598 -
Lja3g1912 515 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 22 514 - -
Lja3g1912 515 MobiDBLite consensus disorder prediction 96 110 - -
Lja3g1912 515 PANTHER GLYCOSYLTRANSFERASE 22 514 - -
Lja3g1912 515 Coils Coil 489 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1912 Lja-Chr3 22042615 22046772 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1912 - - gmx:100790123 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1912 3 22042615 22046772 Lja3g1912 3 22042615 22046772 ECH