Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1904 ATGAAGACTCTAAAAATTTGTCCAAATTATTTTCAAACAATTCTCTTACTTCTAATTATTATTGTAGCAACCTTCTGGCTTAGCACTGAAGCTGCTGCCACCTGCAAACCCAGGGGAAGGTTAAGGGCAAAAAAACATCTTCCTAAACATTGCGGTGAGTGTTGCAAACCAGGCCATTTTTACACCACATTCAAGTGTTCCCCACAGGTATCTCACCACACAAAGGCAACACTAACACTGAATAGCTTTGCGAAAGGTGGGGATGGAGGTGGACCATCAGCATGTGACAACAAGTTTCACTCAGACAACACTCCTGTTGTAGCACTGTCAACTGGATGGTTCAATCATAGAAAACGGTGTCTTAAAAAAATCACCATCTTTGGAAATGGAAGAAGGGTCAAGGCCATGGTTGTTGATGAGTGTGACTCAACTGATGGCTGTGATGGTGAGCATGGTTTCCAGCCTCCATGTCGGAACAATATAGTTGATGCTTCTAAGGCTGTTTGGAAGGCTTTGGAAGTTCCAGAAAATGATTGGGGTGAAATGGAAATTTTCTGGGCCGATGCTTGA 570 0.4298 MKTLKICPNYFQTILLLLIIIVATFWLSTEAAATCKPRGRLRAKKHLPKHCGECCKPGHFYTTFKCSPQVSHHTKATLTLNSFAKGGDGGGPSACDNKFHSDNTPVVALSTGWFNHRKRCLKKITIFGNGRRVKAMVVDECDSTDGCDGEHGFQPPCRNNIVDASKAVWKALEVPENDWGEMEIFWADA* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1904 189 PANTHER RIPENING RELATED PROTEIN FAMILY 13 189 - -
Lja3g1904 189 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 13 189 IPR039271 -
Lja3g1904 189 Gene3D - 72 188 IPR036908 -
Lja3g1904 189 SUPERFAMILY Barwin-like endoglucanases 67 187 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1904 Lja-Chr3 21879558 21880127 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1904 - - zju:107426131 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1904 3 21879558 21880127 Lja3g1904 3 21879558 21880127 ECH