Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1887 ATGGGTTCTAATTCATTGAAGGACTATCTCAAAAGATATGAAAGTAACACTGAAGAAGAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGCAGAAGAAGAAAAGTCAACCACAAGCAACTGGCTTGTTAGTTGTGGACGAAGACCCGACATGGCAGAAACCCGTAGATCTTGGAGAAGAAAATGATGACAACTCCTCAGATGAAGAGAAGCCAGTAGTTGATGAAGACATCGAAGTGAAGCGTATGAAGAGGCTGGAGCAGTCGAGGGCCAGACATCATTATAATGCTATATCCGAGGATGGAAGTGGTTGGGTTTCACTTTCTTCTGAATCAACAAATCCTTGTAATTCAAATAATGATATCTCTCCACCTCGTAAACGGAGGGTTCGAAATGACACCCCTTCGCCAGAACCTGAGTTAAATCCTTCAACTTCTAATAGGAAGAGTGCTGATTTATCACCCCCTCATCGCCAGCTGAAACGCAATGACACTCCATCACCTGATCATTACTCACAACCAGAAAATTCTGAGGGACTGAATTCTGACTTATCTCCCCCTCGTAAAAGAAGAGTTCAAAGTGTTACTGTTTCAGAAGTACACGAGTCAATGTCATCCAAATCAAAATTTGAAGATACTGATTTGTCACCTCCTCGGCTACAACATAAAGACAGTGGCAAAAGAAATTATGAGACTTCTGATTTGCAAGATCTTTCTCCGCCTCGACGAGGTCGTCATGATTCTCCCACGATAGATAATTTACATGGATCTGCAGCACTAGACCTTTCACCCCCAAGGAAAAGCCAGAAGAATGTTGCAAGATCGAGTTCATATGATCATTCGCATCTTCCTCCACCTAGTCGTTCAGTAAAAGTTGATTCAAATAGATCTTTGGATCCTGACCTATCTCCACCTAGGAAGAATTCAAAGGAGCTATCTATTCCAGCATCTGTGAATGAAAGAAAAACAGGTTTACTTTCTAGTAAGGATATCAGAAATGAAATTGACAAAAAGAAGAAGGATGATATGTTAAGATTTAAACAGATGGACCCTTCCATTAGTGGGCGCAGTGCTGAACCTGTATATCGTGATAAAGTAAAAGGAACACGCATTTCCAAAGAGGAATACTTGAAGTCAAAACAGAAAGTAGACGAAAAGGCCAAGGCGATTGAAATAGAATGGGGCAAGGGCTTAGCTCAAAAGCGGGAAGCTGAGGCTAAGCTGAAGGAACTAGAACTTGAGAAAGAAAAACCTTTTGCGCGGACCAGAGATGATCCTGAACTTGACAAAATGATGAAGGAGAGGGTAAGATGGGGTGATCCCATGGCACATCTGGTAAAGAAAAAATATCCAGAACCTGTTCTTCCAAACTTGGGGGATAGTGAGAAGATGATGGAATCAGGCTTTGTGGTTCCTCAGGACATTCCAAATCATAGCTGGTTAAAAAGAGGTTTAGACGCTGCTCCAAATCGGTACGGGATAAGGCCAGGGCGGCACTGGGATGGTGTTGATCGCAGTAACGGATTTGAGAAGGGACTGTTCAAGAGAACAAATGAAAAGCAATCTAGAGATAAAGAAGCCTATCTTTGGTCTGTGTCTGATATGTGA 1605 0.4193 MGSNSLKDYLKRYESNTEEEKKKKKKKKKKQKKKSQPQATGLLVVDEDPTWQKPVDLGEENDDNSSDEEKPVVDEDIEVKRMKRLEQSRARHHYNAISEDGSGWVSLSSESTNPCNSNNDISPPRKRRVRNDTPSPEPELNPSTSNRKSADLSPPHRQLKRNDTPSPDHYSQPENSEGLNSDLSPPRKRRVQSVTVSEVHESMSSKSKFEDTDLSPPRLQHKDSGKRNYETSDLQDLSPPRRGRHDSPTIDNLHGSAALDLSPPRKSQKNVARSSSYDHSHLPPPSRSVKVDSNRSLDPDLSPPRKNSKELSIPASVNERKTGLLSSKDIRNEIDKKKKDDMLRFKQMDPSISGRSAEPVYRDKVKGTRISKEEYLKSKQKVDEKAKAIEIEWGKGLAQKREAEAKLKELELEKEKPFARTRDDPELDKMMKERVRWGDPMAHLVKKKYPEPVLPNLGDSEKMMESGFVVPQDIPNHSWLKRGLDAAPNRYGIRPGRHWDGVDRSNGFEKGLFKRTNEKQSRDKEAYLWSVSDM* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1887 534 Coils Coil 10 36 - -
Lja3g1887 534 MobiDBLite consensus disorder prediction 203 230 - -
Lja3g1887 534 MobiDBLite consensus disorder prediction 136 152 - -
Lja3g1887 534 PANTHER BUD13 HOMOLOG 4 534 - -
Lja3g1887 534 MobiDBLite consensus disorder prediction 324 346 - -
Lja3g1887 534 MobiDBLite consensus disorder prediction 165 202 - -
Lja3g1887 534 MobiDBLite consensus disorder prediction 73 96 - -
Lja3g1887 534 MobiDBLite consensus disorder prediction 309 323 - -
Lja3g1887 534 MobiDBLite consensus disorder prediction 1 364 - -
Lja3g1887 534 Coils Coil 372 392 - -
Lja3g1887 534 MobiDBLite consensus disorder prediction 267 292 - -
Lja3g1887 534 MobiDBLite consensus disorder prediction 101 122 - -
Lja3g1887 534 Pfam Pre-mRNA-splicing factor of RES complex 359 517 IPR018609 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1887 K13106 - gmx:100783213 686.797