Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1879 ATGGCAACGGCGAAACCGAAACGTAACTTCCCTCCGATAACAGAATGCAACGGAACTGCTTCGTCGGCGCGTGAGTCCGTCGCCGCCGACCTCGACGGCACGCTTCTCATCTCCCGGAGCTCGTTCCCGTACTTCATGCTCGTCGCCGTCGAAGCCGGAAGCCTCTTCCGTGGCCTCATCCTCCTCCTCTCCCTCCCCTTCGTCATCGTCTCCTATCTCTTCATCTCGGAAGCCATCGGAATCCAGATCCTCATCTTCATCTCCTTCGCCGGACTCAAAATCCGCGACATCGAGCTCGTCTCACGCGCCGTTCTTCCCAGGTTTTATGCGGCGGATGTGAGGAGGGAGAGCTTTGAGTTGTTTGATCGGTGCAAGAGGAAGGTGGTGGTGACGGCGAACCCGACGGTGATGGTGGATGCGTTTGTGAAGGACTTTCTCGGCGGGGATAAGGTGTTGGGAACTGAGATTGAGGTGGATCCGAAGACGAAGAAAGCTACTGGGTTCGTGAAGAAGCCTGGTGTGCTGGTGGGAGATCAGAAGCGTTTGGCGATTTTGAAAGAGTTCGGTGAGGAATCGCCTGATATTGGACTTGGAGATCGTAAAACTGATCACGATTTCATGTCTATTTGCAAGGAAGGGTATATGGTGCCACCAAGCAAATCAGCAAAACCAGTCCCACAAGACCGGTTGAAGAGCAGGCTCATCTTCCACGACGGCCGCTTCGTGCAGCGACCAGACCCACTCAACGCCCTCATCACCTTCACATGGCTCCCCTTCGGCTTCATCCTCTCCATCATCAGAGTCTACTTCAACCTCCCTCTCCCTGAACGCATTGTCCGCTACACCTACGAAATGCTGGGCATCAAGCTCGTCATCCGCGGCCACCGCCCTCCACCACCATCCCCAGGAACCCCCGGCAACCTCTACGTCTGCAACCACCGCACCGCCCTCGACCCCATCATCATCGCCATCGCCCTCGGCCGTAAAGTCTCATGTGTCACCTACAGTGTCAGCAAGCTCTCCCGCTTCCTCTCCCCCATCCCGGCGGTCGCGCTCACCCGCGACCGCGCCGCCGACGCCGCCCGTATCAAGGAGCTTCTCCAAAAGGGTGACCTCGTGGTGTGCCCTGAGGGCACCACGTGCCGTGAGCCTTTCTTGCTGAGGTTCAGTGCTTTGTTTGCAGAGCTCAGTGACCGGATTGTCCCCGTCGCCGTTGACTGTAAGCAGAGCATGTTCTACGGGACCACCGTGCGTGGTGTCAAGTTCTGGGACCCTTACTTCTTCTTCATGAATCCTAGGCCGGTTTATGAGGCTACCTTCCTTGACCGGTTGCCGGAGGAGATGTCGTGTAAGGCCGGAGGGAAGTCGTCGATTGAGGTGGCGAATCATGTCCAGAAGGTGTTGGGGGATGTTCTTGGGTTTGAATGCACTGGCTTGACCAGGAAAGATAAGTATTTGTTGCTGGGAGGGAATGATGGGAAGGTGGAGTCCATGTATAGTGGCAAGAAGCAGTGA 1515 0.565 MATAKPKRNFPPITECNGTASSARESVAADLDGTLLISRSSFPYFMLVAVEAGSLFRGLILLLSLPFVIVSYLFISEAIGIQILIFISFAGLKIRDIELVSRAVLPRFYAADVRRESFELFDRCKRKVVVTANPTVMVDAFVKDFLGGDKVLGTEIEVDPKTKKATGFVKKPGVLVGDQKRLAILKEFGEESPDIGLGDRKTDHDFMSICKEGYMVPPSKSAKPVPQDRLKSRLIFHDGRFVQRPDPLNALITFTWLPFGFILSIIRVYFNLPLPERIVRYTYEMLGIKLVIRGHRPPPPSPGTPGNLYVCNHRTALDPIIIAIALGRKVSCVTYSVSKLSRFLSPIPAVALTRDRAADAARIKELLQKGDLVVCPEGTTCREPFLLRFSALFAELSDRIVPVAVDCKQSMFYGTTVRGVKFWDPYFFFMNPRPVYEATFLDRLPEEMSCKAGGKSSIEVANHVQKVLGDVLGFECTGLTRKDKYLLLGGNDGKVESMYSGKKQ* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1879 504 Gene3D - 102 230 IPR023214 -
Lja3g1879 504 CDD LPLAT 283 441 - -
Lja3g1879 504 Pfam Acyltransferase 306 396 IPR002123 GO:0016746
Lja3g1879 504 PANTHER BNAC05G00450D PROTEIN 5 502 - -
Lja3g1879 504 Pfam haloacid dehalogenase-like hydrolase 28 207 - -
Lja3g1879 504 PANTHER ANCIENT UBIQUITOUS PROTEIN 5 502 - -
Lja3g1879 504 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 225 493 - -
Lja3g1879 504 SMART plsc_2 307 408 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1879 Lja-Chr3 21526206 21530165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1879 1 503 Acyl Lipid Metabolism Gene Families AT4G00400 81.113 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1879 K13508 - gmx:100794137 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1879 3 21526206 21530165 Lja3g1879 3 21526206 21530165 ECH