Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1878 ATGGCTATGAGTAGTTTGATTTCCAACCGCAACTTCCTTGCCTCAGGAAATGTATGTAGATCAGGAAAGGATCTATCACTTCAAACAGGGGGGATTTCTGTTTCTGGTGTATCTGCTACCCGATACAGTGGCTGGATTACAAAGGATCCTATCTCGAGGTGCCAGCATGCAGTGAATTATCAAACTAATTCACTTTTGGTAGAGAGAGTTTCAAAACTAAAGGCCTGCAGAAGAAGTGAATCGTACCCTTTTCCAGCTCCCTATTGCGGTAGTAATGTTGAATGTAGGGAAGTATATGGACTTGGTTTGGGCAGAAGAAAGCGGCCACTGCCTGAGGTTGGCAAAGCGAATAAGTTCCGGGCTTGTTACAAGTCTGATGAGTATGAAAATGCCGAAACAAATATGGATCCACTACAATCAGCTGAAGGGACTGGTGAAGCCATTCTTCTGCAAGGAGATCTGCAACAATCATCTCCTCGGAAGCAGCAGTTTCCGAAGCGTTGGGTTATTGTACTGCTATGTTTTTTTGCATTTCTTCTGTGTAACATGGATCGCGTAAACATGAGCATAGCTATACTTCCAATGTCTCAAGAGTTCAACTGGAACAGTGCAACAGTTGGCCTAATTCAGTCATCTTTTTTCTGGGGATATCTACTTACTCAGATACTTGGTGGCATATGGGCAGACAAACTTGGTGGAAAGGTAGTACTGGGTTTTGGAGTTATCTGGTGGTCAATTGCAACGGTTTTTACTCCTATTGCTGCAAGGCTTGGGCTTCCATGTCTGCTTATTATGCGTGCCTTCATGGGAATTGGCGAGGGTGTTGCCATGCCTGCAATGAACAATTTACTTTCCAAGTGGATTCCAGTATCAGAGAGAAGCAGATCACTTGCACTAGTATATAGTGGCATGTACCTTGGTTCTGTGACAGGCTTGGCAGTCTCACCTTTTCTAATCCAGAAATTTGGGTGGCCGTCAGTGTTTTACTCATTTGGATCCCTTGGTAGTATCTGGTTTGCCGTATGGTTGAGCAAAGCATACAGCTCACCAAATGACGACCCAGATGTTGGGGAAGAAGAGAAAAGGCTCATACTTGGAGGCAGTGTTTCAAAAGAACCTGTGACAGTTATTCCTTGGAAATTAATTTTATCAAAACCACCTGTTTGGGCTTTAATTGTCTCTCACTTCTGCCACAACTGGGGCACATTTATCCTATTAACCTGGATGCCTACGTACTACAATCAGGTTCTGAAATTCAACCTCACTGAATCTGGCCTCTTGTGCGTCTTGCCATGGTTAACCATGGCTGCTTTTGCAAACATAGGAGGCTGGATTGCTGACACACTTGTTAGTAAAGGATTTTCTATAACAGCTGTTCGAAAGATCATGCAGTCAATCGGATTTCTGGGTCCTGCGTTTTTTCTTACACAGCTAAGCCATGTCAAAACACCCGCCATGGCAATACTGTGCATGGCTTGCAGTCAGGGATCTGATGCATTTTCGCAATCTGGTTTATATTCCAATCACCAAGACATTGGACCACGCTATGCTGGAGTATTGTTGGGACTGTCAAATACTGCTGGAGTGCTTGCTGGTGTTTTTGGTACTGCTGCGACTGGATACATACTCCAACGAGGTTCCTGGAATGATGTGTTTAAGGTTGCTGTTGTACTGTACATAATAGGCACATTAGTCTGGAATATCTTTTCAACTGGTGAGAAAATTCTTGACTGA 1734 0.4383 MAMSSLISNRNFLASGNVCRSGKDLSLQTGGISVSGVSATRYSGWITKDPISRCQHAVNYQTNSLLVERVSKLKACRRSESYPFPAPYCGSNVECREVYGLGLGRRKRPLPEVGKANKFRACYKSDEYENAETNMDPLQSAEGTGEAILLQGDLQQSSPRKQQFPKRWVIVLLCFFAFLLCNMDRVNMSIAILPMSQEFNWNSATVGLIQSSFFWGYLLTQILGGIWADKLGGKVVLGFGVIWWSIATVFTPIAARLGLPCLLIMRAFMGIGEGVAMPAMNNLLSKWIPVSERSRSLALVYSGMYLGSVTGLAVSPFLIQKFGWPSVFYSFGSLGSIWFAVWLSKAYSSPNDDPDVGEEEKRLILGGSVSKEPVTVIPWKLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAAFANIGGWIADTLVSKGFSITAVRKIMQSIGFLGPAFFLTQLSHVKTPAMAILCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWNDVFKVAVVLYIIGTLVWNIFSTGEKILD* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1878 577 Gene3D MFS general substrate transporter like domains 375 575 IPR036259 -
Lja3g1878 577 ProSiteProfiles Major facilitator superfamily (MFS) profile. 170 574 IPR020846 GO:0022857
Lja3g1878 577 Gene3D MFS general substrate transporter like domains 164 353 IPR036259 -
Lja3g1878 577 PANTHER SOLUTE CARRIER FAMILY 17 56 577 - -
Lja3g1878 577 CDD MFS_SLC17A9_like 171 570 IPR044777 -
Lja3g1878 577 Pfam Major Facilitator Superfamily 175 535 IPR011701 GO:0022857|GO:0055085
Lja3g1878 577 PANTHER ASCORBATE TRANSPORTER, CHLOROPLASTIC 56 577 - -
Lja3g1878 577 SUPERFAMILY MFS general substrate transporter 153 569 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1878 Lja-Chr3 21511192 21517292 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1878 1 577 Organic Solute Cotransporters AT4G00370 72.774 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1878 K08193 - gmx:100782221 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1878 3 21511192 21517292 Lja3g1878 3 21511192 21517292 ECH