Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1868 ATGTCTCTCAATTCGATTCGGTGGCGTCATCATCTCAACGTGATTCTTCTGCTCAGTGCTCTGTTACTTCATTGTGCTCTCTCCTCTGCAAATGATGAAGTGGGCACCACTGGTGACTTCTTCACTGTTTCCAGCTTCAGCTACCCTCAGACTACTCTTAGACCCTTTGATTTCCGCTATATCAGAGTTGATATACCACCGTGGTTTTCTGCAGTAACCATAGCATTGAAGTCAGATGTAGACCTAGATGTTACAAGAATTGAAAGGGTTCCAAAAAGCACCCTACCAATTATATGCTTTAGAGATGGAAGTCCTCCGCTACCAGATGTTTTAAACACATCTCTAAAAGATTCAGCTGTCTCAGGAATAAATGGTCTTGATGTGGAGCAATGCTTTCCTATGGAGAAAAATATCAGTATGAAATTGACGAATGAGCAGATATCTCCAGGTTCTTGGTACATAGGTCTTTTCAATGGCATTGGAGCTACAAGGACACAATCAAAGATGATTACCCGAGGCCCAGCATACTCCTTTAGTGCCAATATTAGCGTGGCAGCATGCACAAATTCAATGATGAGTGGGAAGTTCTGTAACAGTACAGTCTATCCACTTTCGTGCACAACATCTGATGTCTATGATACATTGAAGGCTACAATAAAGAAGCCAATCATGGAAAATGCAACGACCTGCAAAAGTAAAATTGAAACTTTTTGTGTTCAGGAAGGTCTACCAAACTTTTACTCCTTGGATATATCAAATGTGGTAGAAGAAGTGACCATTATGGTAGCAAATGTCAGATTAAATATTACATCTTCAAGTAATGCTTCTGGTGCAAGTGATGTTAATTTATTGGGTTTTGCGCGCCATGGTGCAATACCTGCAGATTCTGTGTTTGATTATTCCAGTAATTTAAATAAAGCCCCGATGGTTATTCGCTCTCCACGGATTGGTCGTTTGTACATTAGTATATTACCAGTTAATCTTACAAAAAAATTTGGAGGGACGCAGGATGGCAATGTAAAAGTTTGCTATTCGATGGAATCACAAGTGCTACAGTGCCCACTTGGGAAAGCTGGACCAAATTGCACAATGGGTAGCTACAATCTTCAGACAGTTCTAAGGAAAGGTCCAACCCCCTTTGAATCATATTATTTACCTGTCGGTGAAGGAGCATCTTCTGCCAACTTTCCTCTTGAGCCACTTTCTAACAGCTCATCAAACAGAGGAGAAACTAATGACATTTGGACTTACTTCACTTTCGACATTCCTCGTGGGGCAGCTGGACGAAATATTCATGTACGGCTATCCTCAGATGTGAAGATCAGTTATGAAGTTTATGCTAGATTTGGCGGATTGCCTTCTCTTGATAGCTGGGACTACTATTATGCTAACGAGACAAAGAAGAGTGATCAATCCATGTTCTTCATGGAATACGATTCAAGTGATGACAATATTGATTTTTACATTATTTATGCTAGAGAAGGAACTTGGGGTTTTGGTCTAAGACATCTTAATACTAGCAGTGATTCTTTGAAACAGCAAACTATCATGTCTTTGGCACTTGAAGGGTGCCCAAAACATTGCTCCTTTCATGGGGACTGTAAATATTCTTTTGATGCGAGTGGATTGACATCATACAGCTTCTGCTCTTGTGATCGAAACCATGGTGGCTTTGACTGTAGCGTGGAAATTGTATCACATAAAGGGCATGTCCTGCAATCAATTTTTCTCATCGCATCAAATGCTGCAGCCATATTTCCTGCCTATTGGGCCCTTCGCCAGAAGGCCCTTGCAGAATGGATTTTGTTCACGTCAAGTGGAATTTCAAGTGGACTATATCATGCATGTGATGTAGGCACCTGGTGTGCATTAAACTACAATGTTCTACAGTTCATGGACTTCTGGCTCTCTTTCATGGCTGTTGTTAGCACTTTTGTGTACCTAGCTACTATTGGTGAAGTCTATAAGAGGGCAATCCACACTGCTGTTGCTATACTTACTGCTCTTATGGCTGCAACTAAGGCAACCAGGTCTTCAAATATTGTTCTTGTGATTGTGATTGGGGCTCTTGGTCTTCTTATTGGATGGTTGGCAGAAATTTCAACAAAGTATAGGTCCCTTTCCTTTTCACTTGGATTCTCACCAAATTTCTTTCTAAGTTTGCAAACTATAAAGCAATGGCTGTATAATCTTGTAAAGACAATCTTGAGACGGTTCCGCTGGGCCTTTTTATTGGCCGGTTTTGTTGCATTGGCCATGGCAGGAATAAGCTGGACACTTGAAACCAGTTCAAACTACTGGTTTTGGCATAGCTTTTGGCATGTTACAATATACACATCTTCTTTCTTCTTCCTTTGTTCAAAAGTAAATATTGTCGATGATGCTGAGAATCAGCTACCGGCAAATGAAAATTATGAACTTACTCGTCAGGATTCATTTCCAAGAGATAGTTAG 2454 0.4063 MSLNSIRWRHHLNVILLLSALLLHCALSSANDEVGTTGDFFTVSSFSYPQTTLRPFDFRYIRVDIPPWFSAVTIALKSDVDLDVTRIERVPKSTLPIICFRDGSPPLPDVLNTSLKDSAVSGINGLDVEQCFPMEKNISMKLTNEQISPGSWYIGLFNGIGATRTQSKMITRGPAYSFSANISVAACTNSMMSGKFCNSTVYPLSCTTSDVYDTLKATIKKPIMENATTCKSKIETFCVQEGLPNFYSLDISNVVEEVTIMVANVRLNITSSSNASGASDVNLLGFARHGAIPADSVFDYSSNLNKAPMVIRSPRIGRLYISILPVNLTKKFGGTQDGNVKVCYSMESQVLQCPLGKAGPNCTMGSYNLQTVLRKGPTPFESYYLPVGEGASSANFPLEPLSNSSSNRGETNDIWTYFTFDIPRGAAGRNIHVRLSSDVKISYEVYARFGGLPSLDSWDYYYANETKKSDQSMFFMEYDSSDDNIDFYIIYAREGTWGFGLRHLNTSSDSLKQQTIMSLALEGCPKHCSFHGDCKYSFDASGLTSYSFCSCDRNHGGFDCSVEIVSHKGHVLQSIFLIASNAAAIFPAYWALRQKALAEWILFTSSGISSGLYHACDVGTWCALNYNVLQFMDFWLSFMAVVSTFVYLATIGEVYKRAIHTAVAILTALMAATKATRSSNIVLVIVIGALGLLIGWLAEISTKYRSLSFSLGFSPNFFLSLQTIKQWLYNLVKTILRRFRWAFLLAGFVALAMAGISWTLETSSNYWFWHSFWHVTIYTSSFFFLCSKVNIVDDAENQLPANENYELTRQDSFPRDS* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1868 817 Pfam Protein of unknown function (DUF3522) 570 775 IPR021910 GO:0016021
Lja3g1868 817 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 16 815 IPR021910 GO:0016021
Lja3g1868 817 ProSitePatterns EGF-like domain signature 1. 549 560 IPR000742 -
Lja3g1868 817 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 16 815 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1868 - - gmx:100777848 1337.4