LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja3g1858	ATGGAGACTCAATCTGATGGTAATGAGGATGCTATAGCTACCATTAAAGATATTAGGCAACAGCTTGAAGCTCGCATCGATTCCCAGCACAAGGCTCACATGGAGGTGCTTGGTAATATACAAGCCATAATACCTAATCTTGTCTCGTCGCTTGACCTTTCTCTCAAGGTTGTCTCTTCGTTCAACCATCGTCCTTTTGCTCCGACACCTTCCCTGCCTCCGCCTGATCCTAAATTGAATCCTAAAAAAGCTTCTAAGTTAGCTCACCGTTCTAATGCTGAAACCAGCACTGATGGCTCTGTTGAGGCTGACTTGTTGAATCCCAAGAGTCAAAAGACCGATAAGCCTCTGGATTCAAACCAAGCTTGCCAGGTAGAGTCTGAGAGGCTTAGTCCATTAGCTGTGGTTCGAACAATGGTCGCTGTTTGTCTGTTAGGGCGAGTACCCTTCTCACCAATTGATTCTTCCACTGTGTTGAGGGAATTGGAGAATGATCAGACAGTGACACCGGCAGAGAAGGCTGCACTTCAGGAGCTTGGGGGTGATTCAGGGGCTATGCATGCTGTGGAGATGGCTTTGAGGTCAATGGCAGATGATAATGGTGGTATTGAATTGGAGGAGTTTGTGGTGAGTGGCAAGGCAAGAATTATGGTTTTAAATATAGACCGAACTCGGCTTTTGAGAGAATTGCCAGAAAGTGCACACTATCAGCAGATTGAATCAAGTTCTGGAGATGGGAATGTGAATCAAAATCAAGGTCAGAAAATTACTACTAGTGGCCCTAATGTGAATGGTGGTTTGCTTGGGATGGCAAGACCAGTTCTGAGGCCACCAATGTCTGATATGTGGATACCTCATGGGGACCCCCATATGTCAGGGTTACAACCAATATTTTCAGGAGGACCAAGGGGTGCACCTAGAGTAGTGGGCATGATTGGGACACATAGAGGTATAGGTATTCCATCAATGCATAGACCCCCGTTGGGGCCAAATGCACCAGGGAGTAGTCCTAATGGAATGCCACAGAAACCAAGTACAGTGGAGGATGATATGAAGGATCTTGAAGCTTTGTTGAATAAAAAATCATATAAGGAGATGCAACAATCTAAAACCGGTAAGGAGCTTTTGGACCTAATTCACCGACCAACAGCAAGAGAGACTGCTGTAGCTGCCAAGTTCCGAACAAGAGGTGGTTCTCAGGTGAGGCAATACTGTGACTTACTGACAAAAGAGGATTGCCGACGTCAGTCCGGTTCCTTTATGGCATGTGTTAAGGTTCATTTTAGACGTATCATTGCTCCTCATACTGACGTCAATTTAGGAGACTGTTCCTTTCTTGATACCTGCCGACACATGAAGACATGCAAGTATGTTCATTATGAGTATGATCCTGTACCTGACATGCCTCCGACAATGATTGGTGGTGCTCCTCTTCCTCCCAAACCACTAAAGCAACGTGCTGAATATTGTTCTGAAGCGGAACTTGGTGAACCACAATGGATCAACTGTGACATACGCAACTTTAGAATGGACATTTTAGGTCAATTTGGAGTAATAATGGCAGATCCACCATGGGATATTCACATGGAACTTCCTTATGGAACAATGGCTGATGATGAAATGCGCACTCTTAATGTCCCTGCTCTGCAAACTGATGGGCTTATATTTCTGTGGGTAACTGGACGTGCAATGGAACTTGGACGGGAATGCTTAGAACTTTGGGGATATAAGCGTGTTGAGGAGATCATTTGGGTGAAAACAAATCAACTTCAGCGAATAATCAGAACTGGACGTACTGGTCACTGGCTCAATCACAGTAAGGAACATTGTCTTGTTGGAATAAAGGGTAGCCCTATAGTGAACAGGAATATTGACACTGATGTTATTGTTGCTGAGGTTCGGGAAACAAGCCGCAAGCCAGATGAGATGTATCCTCTGCTGGAGAGGATAAGTCCAAGAACAAGAAAGTTGGAATTGTTTGCTCGCATGCACAATACTCATGCAGGATGGATGTCTCTTGGTAATCAATTGAGTGGTGTAAGATTGGTTGACGAGGGGCTGCGGGCAAGGTTTAAGGCTGCTTACCCAGATGTGGAGGTGCAGCCATCATCACCTCCCAGAGCTTCTGCTATGGAAGTGGACTCTAGTGTTCCTGCTCCTACGAGGAGTCCATTTGCAGTCACAGAACCAAAATCCACAGCGGCGCAGTCTGCAGAGCCTGCAGCTCCAGCAACTTCCATTGCTTCAGAGGAGAAGTCAATGGCCATTGATGTGGTGGACATTGGCTAA	2289	0.4578	METQSDGNEDAIATIKDIRQQLEARIDSQHKAHMEVLGNIQAIIPNLVSSLDLSLKVVSSFNHRPFAPTPSLPPPDPKLNPKKASKLAHRSNAETSTDGSVEADLLNPKSQKTDKPLDSNQACQVESERLSPLAVVRTMVAVCLLGRVPFSPIDSSTVLRELENDQTVTPAEKAALQELGGDSGAMHAVEMALRSMADDNGGIELEEFVVSGKARIMVLNIDRTRLLRELPESAHYQQIESSSGDGNVNQNQGQKITTSGPNVNGGLLGMARPVLRPPMSDMWIPHGDPHMSGLQPIFSGGPRGAPRVVGMIGTHRGIGIPSMHRPPLGPNAPGSSPNGMPQKPSTVEDDMKDLEALLNKKSYKEMQQSKTGKELLDLIHRPTARETAVAAKFRTRGGSQVRQYCDLLTKEDCRRQSGSFMACVKVHFRRIIAPHTDVNLGDCSFLDTCRHMKTCKYVHYEYDPVPDMPPTMIGGAPLPPKPLKQRAEYCSEAELGEPQWINCDIRNFRMDILGQFGVIMADPPWDIHMELPYGTMADDEMRTLNVPALQTDGLIFLWVTGRAMELGRECLELWGYKRVEEIIWVKTNQLQRIIRTGRTGHWLNHSKEHCLVGIKGSPIVNRNIDTDVIVAEVRETSRKPDEMYPLLERISPRTRKLELFARMHNTHAGWMSLGNQLSGVRLVDEGLRARFKAAYPDVEVQPSSPPRASAMEVDSSVPAPTRSPFAVTEPKSTAAQSAEPAAPATSIASEEKSMAIDVVDIG*	763

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja3g1858	762	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	496	656	IPR029063	-
	Lja3g1858	762	MobiDBLite	consensus disorder prediction	698	749	-	-
	Lja3g1858	762	MobiDBLite	consensus disorder prediction	237	264	-	-
	Lja3g1858	762	MobiDBLite	consensus disorder prediction	66	120	-	-
	Lja3g1858	762	MobiDBLite	consensus disorder prediction	321	347	-	-
	Lja3g1858	762	ProSiteProfiles	MT-A70-like family profile.	478	696	IPR007757	-
	Lja3g1858	762	MobiDBLite	consensus disorder prediction	726	743	-	-
	Lja3g1858	762	MobiDBLite	consensus disorder prediction	90	120	-	-
	Lja3g1858	762	Pfam	MT-A70	516	676	IPR007757	-
	Lja3g1858	762	PANTHER	N6-ADENOSINE-METHYLTRANSFERASE CATALYTIC SUBUNIT	1	713	-	-
	Lja3g1858	762	PANTHER	N6-ADENOSINE-METHYLTRANSFERASE	1	713	-	-
	Lja3g1858	762	MobiDBLite	consensus disorder prediction	237	267	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja3g1858	Lja-Chr3	21181409	21186150	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja3g1858	K05925		-	gmx:100782695	1307.74