Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1839 ATGTCAGATACCGACCAAGAAAGACCTCTAGCCCCAGCCAGGGACATCAACGAACCGGCCCACAAAAGCAAACGCCATCAAAGAAGAATCAAGTTGTGTTTGTGTATAACTGTAATCTTTCTTCTACTGGTCATAGTAATTTTAATCTTAGCATTCACAGTGTTTAAGGTCAAAGAACCCAAAGTAACAACTAATGGGATCACATTAAAAAACCTGGACCTCACACTCGATCCAACTCCAATACCTCGAGTTAACCTGAACATGTCCATGTTGATAGACATGTCCATCAAGAATCCAAATGCAGCATCCTTCAAACTAGGCAACACCACAACAATTATTTACTACCGTGGCGCGACGGTGGCGGAGGCGAGGACACCGCCGGGGCTGGTGAAGGCGCGGCGGACTTCAGGGATGAATGTCACGGTGGATATCATGGCTGACCGCCTCGCTTCTAGCCCCGATTTGGTGGCAGATGTGATGGTCAGGGGGAAGAAGATCATGGACACTTACTCGGTAATTTCAGGGAGAGTGAAGATTTTGTTTGTTAAAAAACATGTTGAGGTGAGGATGAATTGCACAGTGACTGTTGACATTTCAAGCAGGGCAATTTATCAGGACATGAGTTGCAAACGTAAAGTGAAACTTTAA 648 0.4537 MSDTDQERPLAPARDINEPAHKSKRHQRRIKLCLCITVIFLLLVIVILILAFTVFKVKEPKVTTNGITLKNLDLTLDPTPIPRVNLNMSMLIDMSIKNPNAASFKLGNTTTIIYYRGATVAEARTPPGLVKARRTSGMNVTVDIMADRLASSPDLVADVMVRGKKIMDTYSVISGRVKILFVKKHVEVRMNCTVTVDISSRAIYQDMSCKRKVKL* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1839 215 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 11 214 - -
Lja3g1839 215 Gene3D - 45 205 - -
Lja3g1839 215 MobiDBLite consensus disorder prediction 1 22 - -
Lja3g1839 215 Pfam Late embryogenesis abundant protein 95 193 IPR004864 -
Lja3g1839 215 SUPERFAMILY LEA14-like 41 152 - -
Lja3g1839 215 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 11 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1839 Lja-Chr3 20885228 20886306 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1839 - - lja:Lj0g3v0344129.1 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1839 3 20885228 20886306 Lja3g1839 3 20885228 20886306 ECH